Gene detail

Detailed information of FUN_022092-T2 in Siderastrea siderea

Genomic Location: contig_20:2985153...3000332
NR annotation: no NCBI-NR hit recorded
Species Siderastrea siderea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

FUN_022092-T2

GCAGCCATGTTTACAACAAGAGAAGATGGCAGATCAGGGACAAGGAAGTCACGATTTTTCTCCTCCTTCTCCGTGTTCCCACGGTCCAGATACTGAAGTGGTCATTCGTCGGGAGGTCTTAGATTCATGTTTGAATACGGAAAATGAAATCAAAGGAGAAACTGTGGAAAACTTCGATAGTGGTTTTGAAAAATGGAGGTGGGAACCGACCAGTCCCCCTCCTGTAAATGACACCTTTGATTTGGATAAAGACAGCCATATAGACACGATCGAGGACAAGTCTAACCCAGGTGTGCTAGATTCTGAAGGTATCTTTCAAAATGAACCCGTTTCAAAAACACTTGAATCACATGTTAACAAATCACCAGGGATGGAATTCAGACACAGATACTCTAACAATGACAGGATGAATTCGCAAGAGGAGGAAACTAAGGTTTTACAAAGTAATGACCATATCTCTGAGCTCGTGGAACCTAAAACGAAGTCTTATGATAAAGCTGAAGAATTTCCATCGGTAATAAAAGAAGAAGCATCTGAACAAAGACTCCAGGATGATGTAAAAAAGCTGTCATTCCTCAAGTACATTATGGCAGAAATTTCCCGTGGAAAACTAATGGAACTTGAAGAAGAAAAGTATACAGAAAGACGTGAAAAGGTGTACACATTCATGAAAATTCCAAGGGAGTTTGAAAAGctGATGGTGTTTGGTTTCACGTTGTGCCTGGAttgttttctgttcatgtttaCAATCCTTCCATTGCGTTTGATTGTTGCTATGTACAAGATTATAACTGGGGTGCTGTTTTGTAGAATGTCAGGAATGTTACAGCCGTCACAGATATGTGATGTTCTGAAAGGATCTATTGTTGTGATTTGTTGGCAACTTTTAACCTATGTGGATGTTTCAGTTTTGTATCACACTGTGCGAGGACAATCAGTCATCAAACTCTATGTCATTTACAACATGTTAGAGaTAGTAGACCGACTGTTTTCTTCATTTGGCCAAGACATCTTAGATGCTTTGTTTTGGACGGCAACTGAACCCAAGGACAGAAGAAGGGAACATATTGGAATTATACCACACTTTGTAATGGCTGTTGTTTATGTGTTTTTCCATGCTGTGTTAGTATTGTTTCAGTCCATCTGCCTCAACGTTGCTGTCAATTCGCACAACAAAGCATTATTAGTGATCATGGTCTCAAACCAGTTTGTGGAACTAAAGGGAAGTGTTTTCAAgaagtttgaaaaaaacaatttgttCCAGATGGCATGTAGCGatATCAGAGAAAGATTTCACTATATCATTTTAACAACTATTGTCGCTCTTCGGAATTTAACAGAATTTAACTGGAATCTTGATCATTTGTACGTTATTTGTCCTTATCTGCTGGCTGTGTTGGTCtctgaatattttgttgattggATTAAACACGCTTTTATCACTAAGTTCAACAATATCCCTGTAGAGGTTTACCGTGAGTACAAAACTCTTCTAGCAGAGGATGCTACTTCAAGTCGTCAAAAGAACGTAAGGAATTATGTATTTTATAACCATAGTAGTTGCCGCGTGATATGCAACCACTTCTAATTGATTCAGACGTTGTTTTGGATATCGACTTGTCCAATTATAATTCGAGGTCGTGGTCTGTTCAAGAGGTCTTTCTCCTttgagaaaagaaacaaaaacctctgggaccagATTGAATTCATAACGTTTCATTTGTTTGCAGGCACACGCTGACCATTTTGATTTAGTTTCTCGTCGCATGGGTTTTATTCCTCTTCCTCTGGGTTCTTTGGTGAGTCTTAAACTGCAGATGTAACATCAGCTCTCATTGTTGTTTACCGTATATTTCTGTTGATGTATTAGCTCAAAGAACTTCGGCCCGgtttgttcgaaagccgatgaACGATAGGGTTCAACGCTTGGTTTGTTTTTCGTTCTCAAGGCTCAAACCGTTAAAGCGAGTTAACCTGACAATTAATTAGGGGCTAGGGTGCATGGCTTCCCTGCTTTTCAAATATAAAGAACTATAATACTTTCCGTATACTGCAAAgagtaaagaaattcaaaagctggcgtttcgagcgttagcccttcgtaaGAGCGAATTTGATTCGCTTATCAACTTAGtggataaatccaaatttttctGTTTCACTTCACCATCGGCGCaggcaccacagtttctttagaaactaacccttaaccctttaagccccaatagtgatcagcatcaaatttctcctcatcatatcagtgatTTGTAccacataaaggtcatgagaattgggaGAATGATCAC

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05346 all species →	DUF747	Eukaryotic membrane protein family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008010 all species →	Family	Tapt1 family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13317 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0030176 all species →	Cellular Component	obsolete integral component of endoplasmic reticulum membrane	Interproscan
GO:0036064 all species →	Cellular Component	ciliary basal body	Interproscan
GO:0045724 all species →	Biological Process	positive regulation of cilium assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_022092-T2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.