Gene detail

Detailed information of FUN_022228-T1 in Colpophyllia natans

Genomic Location: contig_42:311750...316540
NR annotation: XP_020631126.1, uncharacterized protein LOC110068095 [Orbicella faveolata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P36248	Large ribosomal subunit protein uL1 OS=Liberibacter asiaticus OX=34021 GN=rplA PE=3 SV=1
A8F4F7	Large ribosomal subunit protein uL1 OS=Pseudothermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / NBRC 107922 / TMO) OX=416591 GN=rplA PE=3 SV=1
B5YEX9	Large ribosomal subunit protein uL1 OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) OX=309799 GN=rplA PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00687	Ribosomal_L1	Ribosomal protein L1p/L10e family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016095	Homologous_superfamily	Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain	Interproscan
IPR028364	Family	Ribosomal protein uL1/ribosomal biogenesis protein	Interproscan
IPR023674	Homologous_superfamily	Ribosomal protein uL1-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR36427	54S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02863	RP-L1, MRPL1, rplA; large subunit ribosomal protein L1	-	Ribosome	ko03011	deepkoala