Gene detail

Detailed information of FUN_022280-T1 in Colpophyllia natans

Genomic Location: contig_42:639929...645648
NR annotation: XP_020630962.1, solute carrier family 22 member 18-like isoform X1 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P02982	Tetracycline resistance protein, class A OS=Escherichia coli OX=562 GN=tetA PE=3 SV=2
P51564	Tetracycline resistance protein, class H OS=Pasteurella multocida OX=747 GN=tetA PE=3 SV=1
P02981	Tetracycline resistance protein, class C OS=Escherichia coli OX=562 GN=tetA PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07690	MFS_1	Major Facilitator Superfamily	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036259	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR001958	Family	Tetracycline resistance protein TetA/multidrug resistance protein MdtG-like	Interproscan
IPR020846	Domain	Major facilitator superfamily domain	Interproscan
IPR011701	Family	Major facilitator superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24002	SOLUTE CARRIER FAMILY 22 MEMBER 18	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005635	Cellular Component	nuclear envelope	Interproscan
GO:0006810	Biological Process	transport	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K08214	SLC22A18; MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 18	-	Transporters	ko02000	deepkoala