Detailed information of FUN_022308-T1 in Acropora pulchra

Genomic Location: ptg000016l:7398119...7420857
NR annotation: XP_044178702.1, extended synaptotagmin-2-A-like isoform X1 [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q3TZZ7Extended synaptotagmin-2 OS=Mus musculus OX=10090 GN=Esyt2 PE=1 SV=1
A0FGR8Extended synaptotagmin-2 OS=Homo sapiens OX=9606 GN=ESYT2 PE=1 SV=1
Q5FWL4Extended synaptotagmin-2-A OS=Xenopus laevis OX=8355 GN=esyt2-a PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001220 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17047
all species →
SMP_LBDSynaptotagmin-like mitochondrial-lipid-binding domainDomainInterproscan
PF00168
all species →
C2C2 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035892
all species →
Homologous_superfamilyC2 domain superfamilyInterproscan
IPR031468
all species →
DomainSynaptotagmin-like mitochondrial-lipid-binding domainInterproscan
IPR000008
all species →
DomainC2 domainInterproscan
IPR039010
all species →
DomainSynaptotagmin, SMP domainInterproscan
IPR037749
all species →
DomainExtended synaptotagmin, C2B domainInterproscan
IPR051634
all species →
FamilyExtended SynaptotagminInterproscan
IPR037752
all species →
DomainExtended synaptotagmin, C-terminal C2 domainInterproscan
IPR037733
all species →
DomainExtended synaptotagmin, C2A domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45761
all species →
EXTENDED SYNAPTOTAGMIN-LIKE PROTEIN 2, ISOFORM CInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008289
all species →
Molecular Functionlipid bindingInterproscan
GO:0006869
all species →
Biological Processlipid transportInterproscan
GO:0061817
all species →
Biological Processendoplasmic reticulum-plasma membrane tetheringInterproscan
GO:0005509
all species →
Molecular Functioncalcium ion bindingInterproscan
GO:0005544
all species →
Molecular Functioncalcium-dependent phospholipid bindingInterproscan
GO:0008429
all species →
Molecular Functionphosphatidylethanolamine bindingInterproscan
GO:0031210
all species →
Molecular Functionphosphatidylcholine bindingInterproscan
GO:0031227
all species →
Cellular Componentobsolete intrinsic component of endoplasmic reticulum membraneInterproscan
GO:0031234
all species →
Cellular Componentextrinsic component of cytoplasmic side of plasma membraneInterproscan
GO:0035091
all species →
Molecular Functionphosphatidylinositol bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_022308-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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