Detailed information of FUN_022332-T1 in Acropora pulchra

Genomic Location: ptg000016l:7690822...7720003
NR annotation: XP_044179715.1, integrin alpha-8-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P53708Integrin alpha-8 OS=Homo sapiens OX=9606 GN=ITGA8 PE=1 SV=3
P26009Integrin alpha-8 OS=Gallus gallus OX=9031 GN=ITGA8 PE=1 SV=1
P26008Integrin alpha-V OS=Gallus gallus OX=9031 GN=ITGAV PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000604 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01839
all species →
FG-GAPFG-GAP repeatRepeatInterproscan
PF20806
all species →
Integrin_A_Ig_3Integrin alpha Ig-like domain 3DomainInterproscan
PF08441
all species →
Integrin_A_Ig_1Integrin alpha Ig-like domain 1DomainInterproscan
PF20805
all species →
Integrin_A_Ig_2Integrin alpha Ig-like domain 2DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013519
all species →
RepeatIntegrin alpha beta-propellorInterproscan
IPR018184
all species →
Conserved_siteIntegrin alpha chain, C-terminal cytoplasmic region, conserved siteInterproscan
IPR032695
all species →
Homologous_superfamilyIntegrin domain superfamilyInterproscan
IPR013517
all species →
RepeatFG-GAP repeatInterproscan
IPR048286
all species →
DomainIntegrin alpha, third immunoglobulin-like domainInterproscan
IPR000413
all species →
FamilyIntegrin alpha chainInterproscan
IPR028994
all species →
Homologous_superfamilyIntegrin alpha, N-terminalInterproscan
IPR013649
all species →
DomainIntegrin alpha, first immunoglubulin-like domainInterproscan
IPR048285
all species →
DomainIntegrin alpha, second immunoglobulin-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23220
all species →
INTEGRIN ALPHAInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0007155
all species →
Biological Processcell adhesionInterproscan
GO:0008305
all species →
Cellular Componentintegrin complexInterproscan
GO:0005178
all species →
Molecular Functionintegrin bindingInterproscan
GO:0007160
all species →
Biological Processcell-matrix adhesionInterproscan
GO:0007229
all species →
Biological Processintegrin-mediated signaling pathwayInterproscan
GO:0009897
all species →
Cellular Componentexternal side of plasma membraneInterproscan
GO:0033627
all species →
Biological Processcell adhesion mediated by integrinInterproscan
GO:0098609
all species →
Biological Processcell-cell adhesionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_022332-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP