Gene detail

Detailed information of FUN_022350-T1 in Colpophyllia natans

Genomic Location: contig_42:1382718...1387481
NR annotation: XP_020617756.1, uncharacterized protein LOC110055702 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

FUN_022350-T1

TTAAAAAGCTGTTGAAAATCTTGGGAAAATCAAATGTGTTTACAACCAAGAATTTCTCCATGTTCAGAGGCTGTCTGACGAGAACATTACCAGCAGCTGTTAGGCCAAGAGAAACAAAACTGTTATCTGTTGCTTCTCAGCTTATGATGTCAGTTGAAAGTGTAATCACTCAAAAGCTAACAAATGAATTTAAGCCTGTGTATTTAGATGTCATCAATGAAAGCTACATGCATAATGTTCCTAAAGGTTCAGAAACTCATTTCAAGGTGGTAGTTGTGTCTTCAAGCTTTAATGATAAGCCTTTGATTCAGAGACACAGAATGGTCAATGAAATTCTTAAAGAAGAGTTAACAAGTGGTGTTCATGCCTTGTCAATACAGgCCAAGACACCAGAACAGTGGGACAGCAGCACAAAGACAGTTCCAAAGTCTCCACCTTGTTTAGGTGGAAGTGCCAGATAATAGAATGCTGTCAGTGATAGTTGCTTTGATTTAATTCTTCAATTTTGCACTCTATCGAAAGCACTAATTTCTCCCTGTGGCCTGTAAGATTTCAGTTGTCTCCCCTTGGTTGCTTGCTGCTGTAAGAGAGCCTCAGACCAGAGAGGCAACTGAAATTCAGTCTAACTCAAAACAAGACATTTAACCTACAACTACAAAAAATATTATGGGCGCTTTGTGTGACTAACCGCATGGTATAACTTACATTATCCCAGTTGGACCGTACAAAAAAATATGCAACAATTGCTTTTGGAAACTTGCTGTAGTCAAGCTTTAAGTCTCAATGCATGTCTTGCCTGCAGCCAGAGTACAATGTACCGGCATATGTTTCATGTGAGTTTCGCTGGTATTTATTTGGCCTATCAATCAATCACTAGTCACCTTTTCCTTCACTTACGCTGTGTTCTCTGGTCAGGCATGAAACAGAGTGGGACTTGAACCAGCAGCGAGCGCCGGATTTCAAATCGAGTGCTCTAACCACTTGGACACGATGCCTCCGACATAGTTAGTCTCTTGTACTAAATATGCCtccaacaacaataaaaacgaCGATCTTTCAGTAATGAAATCTAAACCATTTCACAGTATTCTTTTGTTGAAAACCGttataaaaataaaccaaggaaATGCCCTAATCAGCTGCTACATATTGAAGTGATTTTTCTATCGTGTTTCTAGTGATATAACTCACAGTAGGCTGCTTAGAACTTTCAAAGTCTAAATTATATCACTGTGAAACTTTTCAGCTTGCATTTCGTTCTCGAGCAAGGAACGATTTTGTACATTCtcaatctctttttttttcattctttttttaatgCTTATATTAAATATACCGGCGAACATTTTCCATCTTGTCTCTATGGAGATCACTTAGATTGTTTTTAAAGGtgtaaaGGTTTAATGGAACTGCACAGAACAACAAACTAAAGCCAGAAAAATAAACCTACAAGCCTAGTCTGCGCACTTTTCGTCTGTCCAAGCTAAGCTGGGAACGCTGCGTTTCAACGCTGTGTATTTGGCAGCTTTTCCATATGAAAGTCGTCGGAAAATGCCTTGCcttacaatttttgctcgcgactcatgtcaacaagtgcaattccacgctaaataccctcccttcgatagccaatcagaacgcgggtttacctttagcaaTGCGattttacaaaaaatgtatgagctcattagcgcccATGTACTTTGATTAGACCGCAACTTTCGCGGAATTAGTTATAGGAAATTTCTACACGAAAACGCTGGAAATTGCATTCCCCAGCTCTCACGACGCAAGGGAGCGTGGCTGGGGAGACGAGGGTCGGGGACATGCTTCCAATCCCAGGCATAGGTTGATGTACGACCTTTATAACGGAGAACTAGTATTCTGTAACGAAGAAATACGTCTAACTTGTTTTCTGTTTCGTCTTGCTGTTAGAGATTTACCATACGGTATTCTTGTACGCATCGAAACctttttaaggtggctctatatagtaatctgcaagtcgttACAATaacatttacacgagcttacttctgcctttgcaaatatttttcgtatAACACTTGATCTAACcaagtatctgtagctttaaatgaataaagggtgatagtttctaaa

Protein

Uniprot

Uniprot term	Description
Q56585	DNA-binding transcriptional regulator BolA OS=Vibrio alginolyticus OX=663 GN=bolA PE=3 SV=1
Q9KPS0	DNA-binding transcriptional regulator BolA OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=bolA PE=3 SV=1
Q86KD0	BolA-like protein DDB_G0274169 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0274169 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01722	BolA	BolA-like protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002634	Family	BolA protein	Interproscan
IPR036065	Homologous_superfamily	BolA-like superfamily	Interproscan
IPR050961	Family	BolA/IbaG family stress response and morphology regulators	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46229	BOLA TRANSCRIPTION REGULATOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005739	Cellular Component	mitochondrion	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K22066	BOLA1; BolA-like protein 1	-	Mitochondrial biogenesis	ko03029	deepkoala