Gene detail

Detailed information of FUN_022414-T1 in Siderastrea siderea

Genomic Location: contig_20:7184042...7267286
NR annotation: no NCBI-NR hit recorded
Species Siderastrea siderea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

FUN_022414-T1

Transcript

FUN_022414-T1

ATGATCGATATCGTTAAGTCTCTCAGAGTGCAAGAAAACGGAGGTGGAATAAGAAAGCAATGTAACAGATATCTACAGCGCGTTAAGTATTACACCATCAAAATGTTGGGTGCTAAGAAAGTAGGAGAGAGCGTGAATGAGGATGTGTTCTTACTCTTACTCGTATATCCTCCGACCATCAGTTTTTTTTGCTCGCGCATCTTGGTGAATAGCTTTCTTGGGCAAAAGTTCTCCGCAGCTTGGGGCGTTCCGGTAGCGATGACAGGCAGTTGTATTCTCAAACACGAGGAAATAACAGTTCCAAGTAGAAATGACAGTGTGGAAAGCACTGAAGACTCCACAGCTTGGActATCTACAACTACCGTGGAAAAGGAATGTATCAACTCAACCTCCAACTTGGTGAGACTGTTCAAATACTCGAAGAGACTGCAGATTCAGGATGGTATCGAGGGTTTTCTTTGCGGAACAAAGCTGTCAAGGGTATATTTCCTAGAACATATATTCACGTCAAGGACAACAAAGATGAATCCTCCAGTGAGTCAGAAAGTGTTTTCAAGGAAGAAGCACTTGTTGAAGAACTGACTTCTGTCCTAAGAGAATGGGGAGCCATGTGGAAACAGGTTTATTTGAGAAGGGAAGAGGCTCTATTTCATGATGTGAAAAACCTGATGCTGGAATTAATGGACTGGAGAcggcagatcttagcaaaggcACTTCCAGTGGACCAGTTGAAGCAATTGAAGCAGAAAGTTACTCAAACAATAGATTATGGAAACAGGACATTAGGATTGGATCTTGTTGTGCGTGACCCTGAAGCAAACATAATAGACCCTGATTCAACAGGGGTTATTGAACTGTACAGACGGCATGTGAACACTTCAAACAGAATAAAGACAGCGTCAAGAGTGGAAACACCCAAGAAAGAAGTTGCTTATTACACAGCGCACAATGTTTATGTCAATGTCAAGCATGTAGTGTGCAATACAACTGATGATGCTCAGGTGTTCCTCTCACTCTATGATGCAAAGGATGAGCGCTTCATCAGTGAACAGTACCTGGTTGCTTGGGATAAAAAAGGAATGCCAAAGGATATTGATAGACTTAACAACCTGACAGTCCTGTTTACAGACTTGGGAGCAAAAGACCTGATTAGAGAACAAGTTTACATTGTGTGCCAGATTGTTAGAGTTGGACGCATGGATATTAAAGAGACAGACAGCAAAAAACTAGCTCACAATCTAAGAAGACCATTTGGCATTGGTTTGTTTTACGTTGGTGACTTGTTTAATGGCACTGCTCAGTATGATGAGGACAAGGAACATTTCCTACAACTTCTTCCAGTTCCAGAGAATCAGTCATTTGATTCTTGGATAAAGAGGATGATTGCACAGCCATCGGAAGGAAACAAGACCGGACAAGGCATTCATATATCACTGAAGCTCCTTTCAGGTGATGTTGAACAGATACGGGAGGAGCATCCACTTCTCGTGACAAAGCAAACCTGTATTGCACGTAAACTTGGTTTTCCAGAAGTCATCATGCCAGGTGATCTTCGGAATGACCTGTATTTAACAATTCACTCAGGGGAATTTGAAAGAGgtagaaaaacaacaaataagaACATCGAAGTCACTATGCATGTTTTGTCTGAAGATGGCACAGTTCTTCCGAGCGTCATCAGTGTTGGGGCAGGAGAGGAACTTGTCAGTGAATACcgttcagttattttctatcatATGGGTAAACCTGAATGGGTGGAGACGATAAAATTGGTCATTCCAATTGAGCAGTTCCATACCTCACATTTAAGGCTGATGTTTAAGCACAGATCTGCTAATGAAGAAAAAGACAGAACTCaaaagtgttttgcattttcaCACACACGACTCATGTACAATGACGGCACCACACTGCAAGATGGGACACACGAACTACTTGTCTACAAGAATGATCATGGAAAGCTGCCGCATCCCCAGTCGTATCTTCATCTTCCTTCCAAAAAGGATGATGTCCAACCCGTCAAGTCAAGTAACGTGCCGTTTACACCAACAAGTGACAAATTTAAGATTCAAACTCTTCTTTGCTCAACTAAACTAACTCAAAATGTTGACCTTCTTGGACTTCTAAAGTGGAGTTCCATGGTTGGCAAATTAAAAGATATTCTGGTTACTGTCATGAAAGTCAGCGGTGAAGAAATTGTTAAGTTCTTGACAGATACTTTTGACGCTCTGTTTGCCATATTGATGGAACACGCCAACAAGTACGACAAGCTTGTATTTGATGCATTGGTGTTCACGATCAGTCTGCTTGCAGACAAAAAGTACCATCACTTCAGGCCAGTTCTAGATGCCTACATAGAGGAGCTGTTTGGAGCCACAAAAGCTGATCACATTCTCATCTCAGTGTTTCTGGAGTATATTAGTTACGCAACAAAAGAACAGCAACCAGACAGAATACGGATGGATCTCCTTCTCAAGGCTATGAAGGCCATGGAATACATTTTCAAGTTCATTGTGCAGTCAAGAATTCTGTTTGAAAGAGCTGTTGGTGACAAGGGCCAGTCTGAATTTGAGGACCGCTTGAGAAAACTGTTCCAGGCTCTAGTGCAGTTGATGGCGGATGTAAAGAATGAGACGCTACTAACTCAGGGTGCTGCATTGAAGTACTTCCCAGCAACCTTTGCAGACTTGATGCAGGTCTTTGATAtcaaagaactgagTTATTTTGCGAGGGAGTTCATCGAGAAAATTCCTGAGAAGCGTTTAATCTCTCAGAAGATGGACTGCATCCACAACATGGTGAAGACCAAGCTGTTTGAAGACCAAGAATCTAGGTATGTTCTGCTTCCAATGGTTGTTGAGCAACTCAAGAATGAGATGACCAAAACCGAAGAAATGAAGATCTGCATCGACATCCTGAATGATATTTTGATCACACTGACAAGAAAAGATGTGGGAAACACACATGACGATGTTCTGCTGGTAGCGACGTCTCTGCTACGTGTTGTGGTGAAAACTGTTATGATTATGGACCGTTCACTGGCTGTTGTGGGGAACTACGTAGCGTGTTTGATAGCCATGCTGCAGCTGATGGATGAGACACATTACCAGAAATATGTGGCACACTTTCCAACAGATCAAGATCTGCTGGATTTTCTGATGGAGCTTTTCATGCTGTTTCGTGAGTTTGTGAGAAACAACATCTTTCCCAAGGACTGGATGGTGATGACCATGGTTCAGAACAGTGTGATCTTGAATGCCATTCAGTATTTTTCTGAGGCCATGCAGGAGCACTTTGGAGCTGGTCCGACATTTGAGATCCAGTTGTGGAACAATTTTTTCCATCTGGCCGTGGATTTTGTGACCCAAGAGTCTCTTCAGTTGGAGAGCTTCAGCACCACAAAACAGGACAAGATCTTGGAAAAGTATGCTGACATGCGTATGATCATTGGATTAAAAATCAGCGAGATGTGGCATTTGTTAGGTGATCACAAATCAGATTTCATTCCTGGGTTGGTTGGACCATTTCTGGAGATGACGTTGATTCCACACAGTGAGCTTCGTCGAGCCACAATTCCAATTTTCTTTGACATGATCCAGTGCGAGTATGCCAGCAAAGAGAATTTCACATCGgtTGAAAGTGAAATTATCAGCAAACTAGACGTTCTTGTTGAAGGCGGTAAAGGCGACACACAGTACAAGGAATTGTTCTACAAGATCTTGCTGGAACTGTTCGAGCCACAACCACCTCAGTTTAAGGAAGATGGCAACAGATTTGTGGGGCTGATCACCAAGCTGATGGAAAGACTGCTGGACTACAGGACTGTGGTACTCGGTGATGACAACATTGACAATAGAATGAGTTGCACTGTTAATGTGCTGACCTTCTACAACGACATTAATAAGGACGAGATGTACGATCGtTATGTGTACAAGTTGTGCGATCTTCACCTCAGTATTGAGAATTACACTGAAGCTGCCTTTACGCTTTTGAGAAGAGCGGATGACCTTCAGtggaGTGATGATCCAATTTATTCGAGCCAAGGAAAGTACAGGGCTAGCACTCAACGACAACTCAAAGAAATGCTTTTTAAGGACATCATCGAATACTTTGACAAAGGAAAGTGCTGGGAGTACGCCATTAAACTGTGTAAAGAACTTGCCAACCAGTACGAGAAGGAGACGTTTGATTTCATTCAGCTGAGCCAGATTTTGATAAAACAAGCTGGATTTTATGACAACATCATCAAGGTTGTCCGCGGGGAGCCTGAGTATTTCAAGGTTGCCTTTTATGGGCTTGGCTTCCCAACATTCCTGAGGAACAAAGTTTTCGTCTATCGCGGCAAAGAATACGAGAAAATTGGAGAGTTTGTTGTTCGTCTTCAAAGCCAGTACCCAAGTGCTCAGATTCTCAAGATGAAGGACGCGATCACCAATGAGATCAAGCATGCGAACCAACAGTATCTTCAAATCAACAAGGTGGAGCCAGTCCCTGTCGAGAGGCGAAAATTCCAGAGAAAAAACGTCCTAGAGCAGATAACCAAATTTTACGAAGTAAACAACGTGAACAAATTCCAGTATTCCAGGGGAGTGCATAAAGGACAAGTGAACAAGGACAATGAATTTGCGACGCTATGGCTGGAAAGAACAACGATTTATACCAAGTTCACATTTCCCGGTATTTTATGCTGGTTCGAGGCAACTGCAATCGACAcgGAGGAACTCACTCCCGTACAGAATGCTTTGGAGACCATGGAGTCAACCAACAAGCAGACCCGAGCACTGATCGATCGACACAAGGCGGACTCCAACATGAACATCAATCCACTCAGCATGAAGCTTGGAGGAATCATTGATGCTGCTGTCATGGGAGGAGTCACTAACTATGAAAAGGCTTTCTTGACTCCCGAGTTTGTTCAAAAGAACCCGGACAGCATGGATCATGTGGAGAAGCTCAAGGACTTGATTGTTGAACAGGTTGAGATCTTAGAGGAAGGAATGGTTTTACACGGAAACCGCGTCTCCGCCGCTCTCAAACCGTTCCACGAAAATCTCGAGAAACGCTTCAAGGAAATGAAGACCAAGACTGCGCATTTGAAAAAGCATCGCGCAAGCACCGTATCGAGGCCACGAACACCCGATGGGCATTTCCCAGTCAGATCGATGACGACTGTTCGGAGGTCAAGTGAGAAGCCTCTGTCCGTCCGAGACAGCCTGGACAAGATGCACCAATCCTACAGAGAATGGACTGAGACTAACAGCAATGTAAACAATCCTCCTCCACTTCCCATGAAGTCCATGACCATGTCGCCAGGGGCAGCACGGACCCGACCCCAGAGAAGACAGACAACCGAAATACCTATGTCGCAGCTGGCAGAAGAGGTAAATACTACGTTCACTTCTATCACATAAGTGTCTTTCCTTTTGGGATTTGTTAAATTCCCCCATCTCCATTATGTGTCCTCCCTTGTTCATCTCTCTCCATTCAAGACGTCGGAATTTGTTAAGCTTCCCGTCTTCTTTTAAACACGGAGTGAGCCTATAAAAGGATCACGGGaagcattttgttggctcatTTGACAGATTCAAATGCAGGGGAAACAACGGTCGTGAAACGTTTGAACAGTTATAAACTTTTCCTTTGACTAAATGGCTCTCTAGTGAAAAATAAAGATGTAAAAAACTTGAATTATAACTAAAACGTGGCCCTGATGCCATTTACAGTAAGTTTCAAATGGAGTTCAGTAAATACAGTCGCCTTTATGTGGACCCGAAATTATTTTGCAGAATAGCCGAAACATTGTGTCCACAGTTGAAACATTCGCGGTCGTTTTAAAATAGacgaaaaccaaaaaaatcattgaacacattttaatttttggtcAGTTCACGAGTGGGACCGATTTAGTACCACGGCTttacaaaaaaagcattttcttttctctgaaaCATAGGGAATAAAATACGATAAAATTTTTagtctgttgttttttttttttaatctggcGTGTCATCTTCAGTCGTGCTTGAATTATTTTTCCCGAGCGGTTTTAAATTTACAAGCATTAGCGGCGGGTATTTTGCCTCTCGATTGTTTTTAGGCGCACGTCGCGCCGACTCGTAAAatggacatttttgtttctgatttttgtcgtcgtcgtcgttgtccgtcagttcacttagtcGTCTTCGGGTcgcgcggcctctgaacaatggccttgctgtTATAATAACATAAACAGATGCCCACTTAAAACGCATTCGATTTTATCAGATTGAAAAccaatctctcaaataccggacattctccttgtgaataaacaataacatgacctttgctGAAGAGTTTCGAAGTTGAATTTTCCATCTATAGCTatgatcgcagaaaacttcagggaatgtattgacgaactacattagaattgctgcagacgtgttaaatcgtgtttttaaagggaatacgccATATCGGACGTCCATAAGCACGCAGTTCACAGTTCATCGCAAGCCAAGGTGTGCCAGCCGGTTACAACATAGCCAAAATACTGCATCACACTTTCACGGTTTTCGTCACGCAGGTTTACGTGTTGTCTCCTTAATGGGAGAAGGGGGGATGCCGTTGAATCACCatgggccgcctgtaaattcttcagaatacccaaaTATCTTTCGTGATAGTGTCACAacattagtcaaaatattgcttcaaatagtcactgttttggtcacacagattcacgTGCTGGGTCTCCTTGAAATTTTCCGAGAGTGTACATGAGGGTCCACTGGAGAAAAAGCGGGCAGGTTTACCATTGGCCGCCTGCagattcttcagaatttcttgttaaaactTCTCAATGCAAAACTCCGAGCATAAAAACGAAGACTTTATTTTCAACTCATAGGACGATCGAAAATTTGCTATTTACTGATTCACTACTGTCTAGTTCGCAGAGctgaaaacaaattatttacaGTGCTTATAGAGCAAAGACGTTTGAAGCAAATTTGGAGTGCTCCTTGTTGGCTTCCCGTCTGGTCGgcgagccaatcaaatgcgcccGTTCGCCCCCCTTTTTGATTTGTGATTGACAGGCTGATCACCTCAGCCTCAGTCATGTAGGATGGCTCCGTGTTTAAGCAACCCCGTCCTGTAATTAGCCATCGTTTTGGACTTCACGTTTTTTATAAACCCCTGTACACCCTTCTTCCCATCCCTACCACCACCTCGCATTTGGTGTTGGAATTAAGCTAACGTTTGCGTTATTAGGAAATTCTGCAACTCTGGAGAAGGACAGAAACTCGTGTACCATTACTTGAGTTTCATTGCAAATCACGTCTCACCTAGTCTGTAGGAAAACGTGCTCTTTAATATCCAAGGGAATAAGTAAGTTATAGTATGTGGAatatcgttttatttcttcgaCCGTTAAACTCAACAATGTTTTGTGGTAGGTTAGTGGTGTGGACTTTCGGAATAGTCAGTTTGAGTTTTCTCCCAAATTCAGTTATGATTGTGATAAAGAACACGTCCTTCAAATGTACTGGGACTAACTGTATGAATTCCTTCTTTCGCAGTTTACAAACCCGGACAGCCCTTCATCTGAGATTGCTCCTCCCAAACCGCCCAGACCTGCACCGCAGGCGCACCATCCTCCAGAGCTGCCACAGAAGGGTAGCCGAAAAAAGGCTGCTGACGTACAACAGCACTCTAGCACTGAATCCATTGGATCAGATAGTACTGAGCCGGCAGAGCAGGTAATGATTGGCAGCTGTCATTTCACGTCTACAATACAATTATCCTTTCCCTTAACTGGTGTTGTACAGTAACTTAGTGTGAGCCATCTTGAACTTTTGTAGCCTGTTTCTCAGGCGGTCTGAGTTCGTTTACTGAATGACGGAGATAAAGCGGATAGCCTCAATACATCTGCCCTATTAACAGTATTACTGAATTACTTAAAAGGCTGCTCTTaggctatttcagaccaaacacctgaattttttgttcttctttaGGTCAAAAAGGCCAAAAATTCCACTCTTTATTCTTAATACCGAAAATAAACGTGAATATTACAATAATGATTATATCCCATCATGCACTTCGCCACATTTATTACCACCCAGCGGTTCCTTTGTGTCAGTCTATCGTAAGATTCCGAACTCATAACGCGGGGCAAGACCATTTACGCGCGAATGTACCTTACATCAGGGAGACTCCCACCCCAGGATAGTAATAAGCACGGGCTGTCATCCACACGATTTTCCGTTTACCTTAAGTTTTCCTGGGAGCGTGCAAATTGTACGGCCTTAAGTACAGCAGGAGACTTCGGTGATTACTCTCAactcgtttttgtttttttctttttttagacACCAGCCCTCCCGCCACGCGCATCCACAATGGCAAAACCAAAAGACTCGCCTCCAGTCCCCCCTAAACAACGGTGAAGATAAGAGAGAACTGTAACAGTATCTGAGTAACAGTTAATTTTAGAATTTAGATTACATAAGAATTCATTTTGTAGCGTCTTAGGAAGGGATTGGTGATTTGaattgagtttgtggatgaaaatCCGTCAAacggaatttttttcttaataccAGCAGAGTAATTTTAGACGTTGATTTCTTCGGTTCATAAATGTGTAAGTGCttcagggcccagttgttcgaagcaggattaagctaacccaggattagtacTCCTTTTTAACGCCCAATGATACGGATTCCTGTAAATTATTTTTGCCcttcattttgactttggttgctttgaaacaataacttgtaatttgctgtgaaaacgcttttaaaataagagaaacaggaaccttggttaaatttaaatcccaggttagcgttaaccggctt

Protein

Gene family

Family type	Membership / link
Ubiquitin family	UBD\|Other\|SH3 · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20422 all species →	DHR-2_Lobe_B	DHR-2, Lobe B	Domain	Interproscan
PF14429 all species →	DOCK-C2	C2 domain in Dock180 and Zizimin proteins	Domain	Interproscan
PF06920 all species →	DHR-2_Lobe_A	DHR-2, Lobe A	Repeat	Interproscan
PF16172 all species →	DOCK_N	DOCK N-terminus	Family	Interproscan
PF20421 all species →	DHR-2_Lobe_C	DHR-2, Lobe C	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035892 all species →	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR042455 all species →	Homologous_superfamily	Dedicator of cytokinesis, N-terminal, subdomain 1	Interproscan
IPR043161 all species →	Homologous_superfamily	Dedicator of cytokinesis, C-terminal, lobe A	Interproscan
IPR001452 all species →	Domain	SH3 domain	Interproscan
IPR043162 all species →	Homologous_superfamily	Dedicator of cytokinesis, C-terminal, lobe C	Interproscan
IPR036028 all species →	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR027007 all species →	Domain	C2 DOCK-type domain	Interproscan
IPR046770 all species →	Domain	DOCKER, Lobe B	Interproscan
IPR027357 all species →	Domain	DOCKER domain	Interproscan
IPR026791 all species →	Family	Dedicator of cytokinesis	Interproscan
IPR046769 all species →	Domain	DOCKER, Lobe A	Interproscan
IPR032376 all species →	Domain	Dedicator of cytokinesis, N-terminal domain	Interproscan
IPR046773 all species →	Domain	DOCKER, Lobe C	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45653 all species →	DEDICATOR OF CYTOKINESIS	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005085 all species →	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007264 all species →	Biological Process	small GTPase-mediated signal transduction	Interproscan
GO:0031267 all species →	Molecular Function	small GTPase binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K13708	DOCK1; dedicator of cytokinesis protein 1	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of FUN_022414-T1 across 85 RNA-seq samples of Siderastrea siderea. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

85Samples

85TPM > 0

7Conditions

219.7Max TPM

88.3Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
holobiont · low.pH_high.temp	20	20	87.93	188.47
holobiont · low.pH Control.temp	20	20	79.93	196.09
holobiont · control.pH_high.temp	20	20	105.09	199.39
holobiont · control.pH Control.temp	19	19	99.91	219.69
Whole organism	4	4	25.60	31.08
unannotated	1	1	26.19	26.19
live coral tissue/skeleton	1	1	21.12	21.12

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR22214406	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	188.47
SRR22214418	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	167.96
SRR22214403	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	162.43
SRR22214412	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	122.01
SRR22214407	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	101.96
SRR22214408	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	101.77
SRR22214409	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	98.99
SRR22214414	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	92.19
SRR22214415	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	91.76
SRR22214416	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	89.79
SRR22214421	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	88.84
SRR22214417	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	82.53
SRR22214404	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	70.89
SRR22214410	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	68.21
SRR22214420	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	63.16
SRR22214419	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	61.26
SRR22214423	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	39.34
SRR22214413	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	38.99
SRR22214402	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	21.45
SRR22214405	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	6.69
SRR22214438	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	196.09
SRR22214428	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	149.12
SRR22214429	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	142.78
SRR22214441	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	130.98
SRR22214445	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	110.58
SRR22214436	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	94.89
SRR22214437	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	85.90
SRR22214434	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	85.57
SRR22214443	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	75.70
SRR22214426	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	70.34
SRR22214440	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	68.42
SRR22214430	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	68.28
SRR22214442	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	67.98
SRR22214435	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	58.47
SRR22214425	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	53.14
SRR22214431	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	50.16
SRR22214439	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	47.14
SRR22214424	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	27.01
SRR22214432	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	10.32
SRR22214427	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	5.65
SRR22214451	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	199.39
SRR22214462	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	163.03
SRR22214459	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	158.22
SRR22214448	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	157.96
SRR22214450	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	154.59
SRR22214461	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	146.71
SRR22214460	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	142.96
SRR22214463	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	122.85
SRR22214452	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	109.18
SRR22214467	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	96.06
SRR22214453	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	91.81
SRR22214458	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	82.56
SRR22214464	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	75.48
SRR22214465	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	72.63
SRR22214449	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	69.48
SRR22214447	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	64.85
SRR22214456	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	64.76
SRR22214446	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	53.95
SRR22214454	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	42.06
SRR22214457	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	33.20
SRR22214481	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	219.69
SRR22214444	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	182.85
SRR22214422	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	171.64
SRR22214547	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	165.94
SRR22214471	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	159.53
SRR22214411	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	156.50
SRR22214468	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	144.83
SRR22214469	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	98.91
SRR22214470	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	95.16
SRR22214535	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	88.29
SRR22214524	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	78.46
SRR22214548	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	68.70
SRR22214400	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	67.57
SRR22214506	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	57.93
SRR22214492	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	37.81
SRR22214466	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	33.88
SRR22214455	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	31.27
SRR22214433	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	26.18
SRR22214546	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	13.15
SRR14295600	Whole organism	Whole organism	not recorded	not recorded	SRP315757	31.08
SRR14295601	Whole organism	Whole organism	not recorded	not recorded	SRP315757	25.97
SRR14295604	Whole organism	Whole organism	not recorded	not recorded	SRP315757	25.91
SRR14295603	Whole organism	Whole organism	not recorded	not recorded	SRP315757	19.43
ERR12861049	unannotated	not recorded	not recorded	not recorded	ERP159209	26.19
SRR12454619	live coral tissue/skeleton	live coral tissue/skeleton	not recorded	not recorded	SRP277390	21.12

Source: CnidoSite RNA-seq expression matrices (SSIDE_TPM, StringTie quantification over 85 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.