Gene detail

Detailed information of FUN_022538-T1 in Siderastrea siderea

Genomic Location: contig_20:9277815...9325979
NR annotation: no NCBI-NR hit recorded
Species Siderastrea siderea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

FUN_022538-T1

ATGGAAGGAGTGAAGAAAGTTTATAATGATGTTCCAAAATCGCCCCGAGATGACCGGCTTTATCGCGGTATAATACTGAACAACAACATGAAGGTTCTTGTGATAAGCGATCCCTTGACTGATAAGGCAGCGGCGGCCCTGGATGTACACATTGGTCACATGAGTGATCCAGATGACCTACCAGGTCTTGCACATTTCTGTGAGCATATGTTGTTTCTTGGGACCGAGAAGtATCCATCAGAGAATGCATTTGCTCAGTTTCTTAGTGAGAATGGTGGATCTTCTAATGCCTTCACTGGCAGTGAACACACAAATTTCTTCTTTGATATCAAACATGAGTGTTTACTTGAGGCTTTGGATCGCTTTGCACAGTTCTTCCTTTGTCCATTGTTTAACTCGGATGCCACTGACAGGGAAGTCAATGCTGTcgactcagAGCATTGTAAGAATCTCTTAAATGATACATGGAGATTAAATCGGCTTGACAAGTCCACAATGGATCCATCTCATCCCTACAGTAAATTTGGAACAGGTAACAAACTGAGCCTTGAAGCTAGACCAAAGGAGAAAGGAATAAGTATTCGAGATGAATTACTCAAATTTCACGATTCATTCTACTCAGCAAATATTATGGCATTGGCTGTTCTAGGCAGAGACTCACTTGATGACCTGACAAACCTAGTCATAAAGCTCTTTTCGGGTGTCGAGGATAAAAATATATCGGTTCCTGAGTACCCTATACACCCATACGGAGATGAACAACTGCAGGTAGAATTGAAAGTGGTTCCAGTCAAAGATGTGAAGTTCCTGAATGTTCAATTTCCCATCCCAGATGTTACCAAACACTATGATTGTAAACCATCTCATTACGTATCTCATCTTCTTGGTCATGAAGGTAAAGGAAGCCTACTTTCAGCGCTCAAAACAAGAGGGTGGGTGAACGGGCTGTTGGCAGGGGCTGCTGCAGGAGCTAAGGGTTTCTTGTTCTTTGTTTGCAACATGGAACTCACCACTGAAGGCCAAGACCACGTCTATGAAATAGTAACCTGTGTATTCCAGTACTTGGAAATGCTAAGGAGACAGGAACCGCTGGAGTGGATCTTTAAGGAGTGCCAGGCTCTCGCTGAAGTCAAATTCCAGTTCAAGGACAAGGAACATCCAAGATCTTATGTCTCTACAATGGTTCGCTCTCTACACGAATTTGAAGTGCAAGATGTCATTGAAGGACAATATTTATTCAGGCGTTTTGATCCTGGCCTTATAAAGATGATTCTTTCATGTCTTGTACCATCAAAAGTGAGATTAACAGTTGTTGGAAAGGCTTTTGAAGGCAACACAGATCTCGTAGAAGAGTGGTATGGAACTGAATACTCTATTCACAAAATCCCTTCCGAGAACATAGAGgaATGGAATAATGTGTCGCTGAACCCCTCTCTACGGCTTCCTGCAGAAAATGAATTCATTCCTACAGACTTTTCCATAAGAGAAAGACCTCAAGATTCTCCATCGATTCCCACCCTTATTAAGGAAAACGCGCTGATAAAGGTTTGGTTCAAGCAAGACGACACGTTCAACCTACCTAAGGCTTGTTTGGTTTTTGAAATGACAAGtccACTGGCTTATGTAGACCCGTGTCACTGCAATATGGCGCAAGTGTTTCTAGAGCTTCTCACTGACTCATTGAATGAGTATGGTTATGATGCTGAGGTAGCAGGAGTGGATTACAAGCTGGAACAAACCATGTATGGATTATGTTTGAGTATCAGAGGATTTAATCACAAACAGCCAGTTCTACTAAAGAAGATCTTTGATCGAATGACAAACTTCCAAGTTGATCCTAAGCGATTTCCACTCATTAAGGAAAGGTGCGCTATGGGCCTGAAGAACTTTGCTGCTGAGCAACCTCATCAGCATGCTTTGTACTTCACATCATTTCTGTTGGAAGAACTGGCCTGGCACAAGGATGAACTCGCAGAAGCTCTAGAAGAGGTTACCGTGGAAAAGTTAGTGGCTTTTATTCCTAATTATTTGGCAAGGCTTCATGTTGAGTGTCTGCTTCACGGAAACTTGTCAAAAGAGGAAGCTTTAGAGACAACAGAGCTTGTGGAAACGATTCTCAAGGAAAACAGCAAGACAAAACCGCTGTTACCACAACAGCTAATCCGACACAGAGAAGTACAACTTCCGAGCAGTTGCTCATATTTATATGAAGTGCACAATGAAGTTCACGACACTTCTAGTTTGGAACTTTATTATCAGtgtGACTTACAAACCACCAAAAGTAACGTTATTTTGGAGCTGTTTTGTCAAATCATCTACGAGCCGTGTTTTAACACTCTCAGGACACAGGAGCAGTTAGGGTACATTGTCTTCAGTGGAGTAAGAAGATGCAATAGTGCCCAGGGTTTCCGCGTGGTGATCCAATCCGACAAGGAGCCTTCCTTGTTAGATTCGCGTGTTGAAAATTTCGTACAAGGAATTGAGGAGTATATTAAAGCAATGTCAGATGAAGAGTTTAAGAAACACGTCGAGTCTCTTGCTGTCAAGAAACTGGAAAAACCCAAGAAACTTTCTTCTGAATTCGCAAGGCACATTAAAGAGATTGTCACACGACAATATAACTTTGACAGAGCTAACATCGAGGTGGCGTTTTTAATGACCGTTACGAAGGAAGATGTTCTGGCATTTTACCGGGATCTTATCGCTGTTAAAGCCCCAAGAAGACACAAGTTGGCAGTTCACATTCTATCCAAAACCATGACCAAGTCTGGAAATAAGAAAGGCCTGAACCACGTCatcgaaaatgacaaaattgaAGATGCAAATCCTCAATCCTCGCCTATAATTATTGACGACGTCGCAGCATTCAAGAGCAGTCTTCCTCTATTTCCTCTGGTGCCTCCGTACCACAGTCAACCAACCAAATCCAAGCTGTAA

Transcript

FUN_022538-T1

ATCGTCTTGAACTTTGCTCGTGACTGTGTCGCGTGATTTATCAACATTTCAAGTGGATTCACTTCTTCAAGGTTCAAGATGGAAGGAGTGAAGAAAGTTTATAATGATGTTCCAAAATCGCCCCGAGATGACCGGCTTTATCGCGGTATAATACTGAACAACAACATGAAGGTTCTTGTGATAAGCGATCCCTTGACTGATAAGGCAGCGGCGGCCCTGGATGTACACATTGGTCACATGAGTGATCCAGATGACCTACCAGGTCTTGCACATTTCTGTGAGCATATGTTGTTTCTTGGGACCGAGAAGtATCCATCAGAGAATGCATTTGCTCAGTTTCTTAGTGAGAATGGTGGATCTTCTAATGCCTTCACTGGCAGTGAACACACAAATTTCTTCTTTGATATCAAACATGAGTGTTTACTTGAGGCTTTGGATCGCTTTGCACAGTTCTTCCTTTGTCCATTGTTTAACTCGGATGCCACTGACAGGGAAGTCAATGCTGTcgactcagAGCATTGTAAGAATCTCTTAAATGATACATGGAGATTAAATCGGCTTGACAAGTCCACAATGGATCCATCTCATCCCTACAGTAAATTTGGAACAGGTAACAAACTGAGCCTTGAAGCTAGACCAAAGGAGAAAGGAATAAGTATTCGAGATGAATTACTCAAATTTCACGATTCATTCTACTCAGCAAATATTATGGCATTGGCTGTTCTAGGCAGAGACTCACTTGATGACCTGACAAACCTAGTCATAAAGCTCTTTTCGGGTGTCGAGGATAAAAATATATCGGTTCCTGAGTACCCTATACACCCATACGGAGATGAACAACTGCAGGTAGAATTGAAAGTGGTTCCAGTCAAAGATGTGAAGTTCCTGAATGTTCAATTTCCCATCCCAGATGTTACCAAACACTATGATTGTAAACCATCTCATTACGTATCTCATCTTCTTGGTCATGAAGGTAAAGGAAGCCTACTTTCAGCGCTCAAAACAAGAGGGTGGGTGAACGGGCTGTTGGCAGGGGCTGCTGCAGGAGCTAAGGGTTTCTTGTTCTTTGTTTGCAACATGGAACTCACCACTGAAGGCCAAGACCACGTCTATGAAATAGTAACCTGTGTATTCCAGTACTTGGAAATGCTAAGGAGACAGGAACCGCTGGAGTGGATCTTTAAGGAGTGCCAGGCTCTCGCTGAAGTCAAATTCCAGTTCAAGGACAAGGAACATCCAAGATCTTATGTCTCTACAATGGTTCGCTCTCTACACGAATTTGAAGTGCAAGATGTCATTGAAGGACAATATTTATTCAGGCGTTTTGATCCTGGCCTTATAAAGATGATTCTTTCATGTCTTGTACCATCAAAAGTGAGATTAACAGTTGTTGGAAAGGCTTTTGAAGGCAACACAGATCTCGTAGAAGAGTGGTATGGAACTGAATACTCTATTCACAAAATCCCTTCCGAGAACATAGAGgaATGGAATAATGTGTCGCTGAACCCCTCTCTACGGCTTCCTGCAGAAAATGAATTCATTCCTACAGACTTTTCCATAAGAGAAAGACCTCAAGATTCTCCATCGATTCCCACCCTTATTAAGGAAAACGCGCTGATAAAGGTTTGGTTCAAGCAAGACGACACGTTCAACCTACCTAAGGCTTGTTTGGTTTTTGAAATGACAAGtccACTGGCTTATGTAGACCCGTGTCACTGCAATATGGCGCAAGTGTTTCTAGAGCTTCTCACTGACTCATTGAATGAGTATGGTTATGATGCTGAGGTAGCAGGAGTGGATTACAAGCTGGAACAAACCATGTATGGATTATGTTTGAGTATCAGAGGATTTAATCACAAACAGCCAGTTCTACTAAAGAAGATCTTTGATCGAATGACAAACTTCCAAGTTGATCCTAAGCGATTTCCACTCATTAAGGAAAGGTGCGCTATGGGCCTGAAGAACTTTGCTGCTGAGCAACCTCATCAGCATGCTTTGTACTTCACATCATTTCTGTTGGAAGAACTGGCCTGGCACAAGGATGAACTCGCAGAAGCTCTAGAAGAGGTTACCGTGGAAAAGTTAGTGGCTTTTATTCCTAATTATTTGGCAAGGCTTCATGTTGAGTGTCTGCTTCACGGAAACTTGTCAAAAGAGGAAGCTTTAGAGACAACAGAGCTTGTGGAAACGATTCTCAAGGAAAACAGCAAGACAAAACCGCTGTTACCACAACAGCTAATCCGACACAGAGAAGTACAACTTCCGAGCAGTTGCTCATATTTATATGAAGTGCACAATGAAGTTCACGACACTTCTAGTTTGGAACTTTATTATCAGtgtGACTTACAAACCACCAAAAGTAACGTTATTTTGGAGCTGTTTTGTCAAATCATCTACGAGCCGTGTTTTAACACTCTCAGGACACAGGAGCAGTTAGGGTACATTGTCTTCAGTGGAGTAAGAAGATGCAATAGTGCCCAGGGTTTCCGCGTGGTGATCCAATCCGACAAGGAGCCTTCCTTGTTAGATTCGCGTGTTGAAAATTTCGTACAAGGAATTGAGGAGTATATTAAAGCAATGTCAGATGAAGAGTTTAAGAAACACGTCGAGTCTCTTGCTGTCAAGAAACTGGAAAAACCCAAGAAACTTTCTTCTGAATTCGCAAGGCACATTAAAGAGATTGTCACACGACAATATAACTTTGACAGAGCTAACATCGAGGTGGCGTTTTTAATGACCGTTACGAAGGAAGATGTTCTGGCATTTTACCGGGATCTTATCGCTGTTAAAGCCCCAAGAAGACACAAGTTGGCAGTTCACATTCTATCCAAAACCATGACCAAGTCTGGAAATAAGAAAGGCCTGAACCACGTCatcgaaaatgacaaaattgaAGATGCAAATCCTCAATCCTCGCCTATAATTATTGACGACGTCGCAGCATTCAAGAGCAGTCTTCCTCTATTTCCTCTGGTGCCTCCGTACCACAGTCAACCAACCAAATCCAAGCTGTAAACCACAGGGATACCTCCAGCCCATCTAGTGCCTTTCTATCACAGTCAACCGACGGTGTCCCACCTGCAAACCACAGGAATACCTCCCTTCCTTTTA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00675 all species →	Peptidase_M16	Insulinase (Peptidase family M16)	Family	Interproscan
PF05193 all species →	Peptidase_M16_C	Peptidase M16 inactive domain	Domain	Interproscan
PF16187 all species →	Peptidase_M16_M	Middle or third domain of peptidase_M16	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050626 all species →	Family	Peptidase M16	Interproscan
IPR011765 all species →	Domain	Peptidase M16, N-terminal	Interproscan
IPR011249 all species →	Homologous_superfamily	Metalloenzyme, LuxS/M16 peptidase-like	Interproscan
IPR007863 all species →	Domain	Peptidase M16, C-terminal	Interproscan
IPR001431 all species →	Binding_site	Peptidase M16, zinc-binding site	Interproscan
IPR032632 all species →	Domain	Peptidase M16, middle/third domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43690 all species →	NARDILYSIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004222 all species →	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0043171 all species →	Biological Process	peptide catabolic process	Interproscan
GO:0051603 all species →	Biological Process	proteolysis involved in protein catabolic process	Interproscan
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_022538-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of FUN_022538-T1 across 85 RNA-seq samples of Siderastrea siderea. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

85Samples

76TPM > 0

7Conditions

851.9Max TPM

327.3Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
holobiont · low.pH_high.temp	20	18	361.70	702.08
holobiont · low.pH Control.temp	20	17	280.10	602.59
holobiont · control.pH_high.temp	20	19	374.18	851.85
holobiont · control.pH Control.temp	19	16	391.07	760.63
Whole organism	4	4	10.88	14.54
unannotated	1	1	13.21	13.21
live coral tissue/skeleton	1	1	10.01	10.01

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR22214403	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	702.08
SRR22214406	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	689.97
SRR22214408	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	588.30
SRR22214418	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	582.36
SRR22214407	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	536.56
SRR22214415	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	460.35
SRR22214420	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	459.36
SRR22214409	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	439.05
SRR22214412	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	427.75
SRR22214421	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	398.53
SRR22214413	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	376.57
SRR22214414	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	344.11
SRR22214404	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	275.11
SRR22214410	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	259.74
SRR22214423	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	256.08
SRR22214417	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	162.99
SRR22214402	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	161.68
SRR22214405	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	113.42
SRR22214416	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	0.00
SRR22214419	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	0.00
SRR22214445	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	602.59
SRR22214442	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	588.15
SRR22214429	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	503.81
SRR22214437	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	462.77
SRR22214439	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	422.03
SRR22214443	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	386.46
SRR22214434	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	383.33
SRR22214425	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	362.44
SRR22214428	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	341.28
SRR22214436	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	326.97
SRR22214430	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	254.12
SRR22214431	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	227.76
SRR22214435	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	210.22
SRR22214438	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	199.80
SRR22214426	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	186.89
SRR22214424	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	92.69
SRR22214441	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	50.76
SRR22214427	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214432	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214440	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214450	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	851.85
SRR22214461	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	679.02
SRR22214464	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	528.31
SRR22214453	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	525.25
SRR22214462	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	521.06
SRR22214459	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	504.77
SRR22214460	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	453.86
SRR22214465	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	440.23
SRR22214467	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	379.40
SRR22214448	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	368.69
SRR22214458	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	364.38
SRR22214447	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	347.79
SRR22214454	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	324.23
SRR22214456	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	301.11
SRR22214457	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	248.40
SRR22214446	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	221.30
SRR22214451	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	199.28
SRR22214449	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	137.80
SRR22214463	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	86.85
SRR22214452	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	0.00
SRR22214469	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	760.63
SRR22214481	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	747.30
SRR22214411	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	682.85
SRR22214547	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	650.24
SRR22214444	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	637.70
SRR22214471	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	589.81
SRR22214466	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	543.85
SRR22214468	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	476.15
SRR22214422	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	419.43
SRR22214506	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	415.94
SRR22214524	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	364.90
SRR22214400	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	300.67
SRR22214535	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	260.58
SRR22214548	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	252.97
SRR22214492	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	171.55
SRR22214470	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	155.70
SRR22214433	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	0.00
SRR22214455	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	0.00
SRR22214546	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	0.00
SRR14295601	Whole organism	Whole organism	not recorded	not recorded	SRP315757	14.54
SRR14295603	Whole organism	Whole organism	not recorded	not recorded	SRP315757	10.67
SRR14295604	Whole organism	Whole organism	not recorded	not recorded	SRP315757	9.64
SRR14295600	Whole organism	Whole organism	not recorded	not recorded	SRP315757	8.68
ERR12861049	unannotated	not recorded	not recorded	not recorded	ERP159209	13.21
SRR12454619	live coral tissue/skeleton	live coral tissue/skeleton	not recorded	not recorded	SRP277390	10.01

Source: CnidoSite RNA-seq expression matrices (SSIDE_TPM, StringTie quantification over 85 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.