Gene detail

Detailed information of FUN_022540-T1 in Acropora pulchra

Genomic Location: ptg000016l:10323932...10334636
NR annotation: XP_029187885.1, sorcin-like isoform X1 [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P30626	Sorcin OS=Homo sapiens OX=9606 GN=SRI PE=1 SV=1
Q5R4U9	Sorcin OS=Pongo abelii OX=9601 GN=SRI PE=2 SV=1
P05044	Sorcin OS=Cricetulus griseus OX=10029 GN=SRI PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000697 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13833 all species →	EF-hand_8	EF-hand domain pair	Domain	Interproscan
PF13202 all species →	EF-hand_5	EF hand	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002048 all species →	Domain	EF-hand domain	Interproscan
IPR011992 all species →	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR018247 all species →	Binding_site	EF-Hand 1, calcium-binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46735 all species →	CALPAIN, SMALL SUBUNIT 1 A-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23924	SRI; sorcin	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.