Gene detail

Detailed information of FUN_022566-T1 in Acropora pulchra

Genomic Location: ptg000016l:10768483...10776377
NR annotation: XP_044179855.1, golgin subfamily A member 6-like protein 7 [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

FUN_022566-T1

TGCATTTGTGCAAGGAGCCGCCTGTTCCAAGCGAAATGTAATTCCTGGGTTAAGGCAAGATTGTGCCCACAGACACAGCTCAGTGCAAACAAAACGAAACATTTCCATCCGTCGGCGTCTGAGGCAACGTTAAGCAACCGATCAAGTATTCTTACAGACGTCAAGCGAGACTCATCAAAACAGAGTTCAAGAGTCTTAAATCAACAAGTCAAGGATTATGCAAATGTGGAGGCTTGCTCCTAACCAAATCCTAAAATACCTCACTCGATTTCTCTGATCACTTGAAGTGTTTCATTTGTCACTGGCCTGGAAAGACTGGTCTGAGATTATTACGAAATGGAACAAAAGCACCGCACCATATTGCAGCATCATTGGTCCAATATCTGTGATAACGTGGAACCCAAGAATATATTGTCAAAATTTGTCACAGTTTTGAAAGAAACCGACAAGGAGGAAATCACGAAACAATCTACAAAACAGGAAAGATGTGACAAGCTGTTACGTATCTTAATCAGAAGAGGAGAGAATGCTTTTGATGCATTCGTGAATTCTTTAGATGAAGAGGCACCCAATCTTGCGTCGGAGTTAATTGAAGCAGTGACAATATTAGAGAAAAACCTCAAAGACGCCAGAACGCAGAGCGCGAAACTTATAAGAACAATTCGCGGTGAATCGAAAACAGAGGAGGACGAAGAGGAAGAAGATCAAAGAAAGATTTCAAAGGATCCTAAAGAAATGAGAAGCCCGCATGGAACCTTTAAACCCGAAAATCAAGAACTCAGCGGGAGTATTCAGGCTCACGGAGGTCACGATGAGAGAGATTCTGCGGCAAGAGAAAATCAAACTTCGGAAAAAGAAATTGAAGAATGGAAAACGAAGAGCGAAAAGTATGAGCAAGAAAATAAAGCATTGCAGAAAAGCTTGGAAAGCGCCATGGAAATACAAGGAAAGTTGAAACTGTTGTCAAGTGACCTTGAGACAGCAAATAAGGAGCAACAAGAACAAATAAGACAGCTCCAAAGGATGAATGAAGAACTACAGGACAAGGTTACCAACGAAAGGGAGCAACACACAGAAGAATCTTGCTCTCGTTGCAAGGGCTTTAGAAATGAGAGAGATTCTGCGAGAAGAAAAAATCAAACTTTGGAAAAAGAAATTCAAGTATTAAAAAAGAAAAGCGAAAATTACCAACGAGTGAACCAAGAACTGCAGAAAAGCTTGGAATGCGTGAAGGAAGAACAAAGAAACTTGCAACTACTGTCAGAGAATCTTGAGGCAGCTAAGAAGGAACAAGAAGAAAAGATAGGACAACTCAAAAGGAAGAATAAAGAACTACAGAACAAGGTTAACAAGAAAACGTCAGAGTTTGAGAAAATACTGGCGCGTGAGCAGAAGCTTAAGAAGAAGGTGGAAGATTGTGTCAAAAACTCCCTAGCAGAGACCGAAACTAAAAATGTCGAGCTTGAGAGCATGAGCGTAGAGAACAAACGCCTCAGCGAGGAGAGCAATGCAGTGAGATTAAAGAATGACAAGCTAACGCAAAAAGTAAAAAGGTTGAAGTTAAGATTAAAGGAAATGCCAGAACATAAAAATGGGCTAGAAGAAAGGCAGGATGTGGAGAAGTTGGAAAAACAGCGCACTAGCACTCTCCAGGACAAAGCAACCTCTCCGAGAGAATTAAAGTGGAAAGGAATATATATCCATAGAAACGATTTTGATAAACACGGCGTTGTCTACGCTTTGGCAAACAAATTCGGAGGAATTTGTTCGTCCCGAACACGCATAATCGCGACCAGATCTTCTGATGGAAGAGGAACGGCGAAGATTGTCCTAGAAAATCAATTGCAAGAAGGCATCGTCAGTGCGACAAAGGCCAAGAAAAATTCATGGTGGTGTGTGGACCTAACAGAGAACTATTCCTTGTACTTAACACACTACACCCTGAGGCATGGGCAAGAACAAAGAGGGTCAGTCCTTCGCAACTGGCGGCTGGAAGGCTCGGTTGATGGCAGTAAATGGATAGTGCTGAAAAACCATAAGAATGATCACGGACTCGGAGAGCTTAAGTCCTGTAGCACATATTGCACATGCACCTGGGCGATCCATGGAGAACTTAACGCCTTTCGCTACTTCAGGATTTTTCAGACGGGCGTGAACTCTTCGGGGAGATTTGGCATCTTTTTATCTGGAATAGAACTGTACGGAGTGCTTGTTGAAATAGGCAATTAA

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000763 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00619 all species →	CARD	Caspase recruitment domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008979 all species →	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan
IPR011029 all species →	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR001315 all species →	Domain	CARD domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47457 all species →	OS05G0345500 PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0042981 all species →	Biological Process	regulation of apoptotic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_022566-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.