Gene detail

Detailed information of FUN_022606-T1 in Acropora pulchra

Genomic Location: ptg000016l:11266363...11294976
NR annotation: XP_044179731.1, stAR-related lipid transfer protein 3-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

FUN_022606-T1

ACCCTTATGAGTTTCTGTTGCAATCAGTGATGAGATCTCATGCACGCCGTGATCCAGAGTTCGCGGAAAGCCAAGACTCTGGTGACGCCGTGTTTAGACAATCAAGAGACTGTCGAACTTTGGTTCAAGCAAGGCGTCTTTTCTGTCTTATCACCGTTTTTGACTTCCTAGCAGCTGTAATTATCTGGCTTCTTTACGCCAATTATGAATCTAGTGATCAAGAGAAGTTATGGAAGAAACTATTATCAGAAATAAGTTGCGACATTGAAAAGTCCCTTTTTGATGTTGTGGTTTTGGCGTTATGCAGAATGCTTATTCTTTTATTAGTATACGCTCGGTGTGTGAGTCGCAAGCGGTACTGCGTAGCGATGACCACTGTTGTTACCACTGGTTTTATTGTTGCTAAAGCTGTGCTTACACTTTTTGAACCTTCAGAAGGAAAGAAACCTCTGTTTTATGTACTTGTTTTGTCTTCACTGATCTTATCATGGGTGGAGGGATGGATACTTGACACGAAGGTAATTCCTTTAGAAGTTGAAGCTGAACAGCGACGTCACCGAGAAAATATGGAGACGAGATCATTGCTGAATTCTCAACACCATGGATACCATACTGCACACTTACTCACTTCAGAGATTAGGTTTTACACACCACAAGGCTCTGACACTTCAGAGAGTGATGTAGACGATCTGGGACAACCAGCAACATTCGGACCATCAGCACAAGATAGAGAATTGATTGAAACAAGCAAGCAAACAATGGCAAAGACTTGGCAATTAATGAGCTTAAACGACGGTTGGAATACGGAGAAAGAAAAGGATGGAATTACAATAGAAAGTAGATTTATTGCTAGTGGGAGAAAAATCTTCAGATTGAAGAGTTCTATAGAGGGCAAAGCTGTAGATATTTTTAACATAACTGTTCTTCAGCCTGAAATGGCTCACAAGTGGGGCGGAAGCATAACGAACTCATATGTTGTACGACGAATTGACGAGCAAACTGATATTGTATACAATTCTACTGGAGTAGAAGGAAGAGGAATGGTGTCTTGTCGGGATTTTGTAAACTTGCGGCGTTGGGAGAGAAGAGGAGATGTTTTCGTTTCTTGTAACTCAACTATCGTTCTCGATGAACTACCCCCTAAAACGGATCACGTAAGAGGTGAAAATGGGCCCGGTGGTTGGGCCTTCCGAGAAGCAGAAGGCAATCCAAACAGAACAGAATATATGTGGTTGTTTGATGTCGATCTTAAGGGATGGCTACCCCAGTCAGTCATTGATATTGCAATGTCACACATGTTATTTCGTACGGGCCAAGGAGTCAGGAGCTATGTTAGAGAAACCTTGGCTGAACGTCAATAGAATTAGTTAGTTTAGTATGTAGGTATTGTAGATAACACGAGCAATATAGAAAATTATCTTACGTGAGAAACTCAGGCTAGGTCGGCCTGAGAAAAATCCAAAGATGTGTCTCAGGAATTCTGAACGAGGTGCGTTCTCTCCGCAATCAAGCGCAAACGATTCTGCATTTTTAGTTTATTGCTCCCGCAAGACACCATGCTATTTTGCAATGTGGTAAAATTACATTGCTTGTGACGGAAGGTCAGTCATTTAATGTCATCAAAGTGTACTCTCTTCTCATGAAAATTTACAGGACTGTTTTAATTCACTAACAACATGGAAAACGAAAATGAGCAACCTAGTCTTCAGTAGGGGTGAAAAATGGGGAACATGGCCATGAGCCCATAAACGGGAGCGTACAACTCTGATAAGGAGCCCGTGTTTCGGCGTTTCTACGTATGAAGCTGTTTTGAAAGTGGCATCGTTTCACTTGATTGGCTCTTATCGATGTTAGGGGCATTGCTCGATTTTTGCAAGACTTCTGATTGGCTAGGAAGGATGCTACGTTAGTCCAAAAATTTAAAATAGCTGTTTTGGCACAATACTCAGAAGTAATACACTTTTGTAAATGGTTTGAACCCAGGAGTCATATCATAAGGTGAAGTGCGATCGTCCGGGTGAGTGTAGTCCTGAGAAGGACTGTTTGAGATGACATTGACTGA

Protein

Uniprot

Uniprot term	Description
Q9DFS4	StAR-related lipid transfer protein 3 OS=Danio rerio OX=7955 GN=stard3 PE=2 SV=2
Q14849	StAR-related lipid transfer protein 3 OS=Homo sapiens OX=9606 GN=STARD3 PE=1 SV=2
F7B909	StAR-related lipid transfer protein 3 OS=Macaca mulatta OX=9544 GN=STARD3 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10457	MENTAL	Cholesterol-capturing domain	Domain	Interproscan
PF01852	START	START domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR023393	Homologous_superfamily	START-like domain superfamily	Interproscan
IPR002913	Domain	START domain	Interproscan
IPR019498	Domain	MENTAL domain	Interproscan
IPR051869	Family	StAR-related Lipid Transfer (STARD3)	Interproscan
IPR000799	Family	Steroidogenic acute regulatory protein-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46121	STEROIDOGENIC ACUTE REGULATORY PROTEIN-LIKE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008289	Molecular Function	lipid binding	Interproscan
GO:0005765	Cellular Component	lysosomal membrane	Interproscan
GO:0005789	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0031902	Cellular Component	late endosome membrane	Interproscan
GO:0099044	Biological Process	vesicle tethering to endoplasmic reticulum	Interproscan
GO:0140284	Cellular Component	endoplasmic reticulum-endosome membrane contact site	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K22291	STARD3; StAR-related lipid transfer protein 3	-	Cholesterol metabolism	ko04979	deepkoala