Detailed information of FUN_022898-T1 in Colpophyllia natans

Genomic Location: contig_44:1562977...1572689
NR annotation: CAH3145245.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q4G056Tyrosyl-DNA phosphodiesterase 1 OS=Rattus norvegicus OX=10116 GN=Tdp1 PE=1 SV=1
Q8BJ37Tyrosyl-DNA phosphodiesterase 1 OS=Mus musculus OX=10090 GN=Tdp1 PE=1 SV=2
Q9NUW8Tyrosyl-DNA phosphodiesterase 1 OS=Homo sapiens OX=9606 GN=TDP1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10283zf-CCHHPBZ domainDomainInterproscan
PF06087Tyr-DNA_phosphoTyrosyl-DNA phosphodiesteraseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019406DomainAprataxin and PNK-like factor, PBZ domainInterproscan
IPR010347FamilyTyrosyl-DNA phosphodiesterase IInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12415TYROSYL-DNA PHOSPHODIESTERASE 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003690Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0003697Molecular Functionsingle-stranded DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0008081Molecular Functionphosphoric diester hydrolase activityInterproscan
GO:0017005Molecular Function3'-tyrosyl-DNA phosphodiesterase activityInterproscan

TOP