Detailed information of FUN_022899-T1 in Acropora pulchra

Genomic Location: ptg000017l:1263867...1268035
NR annotation: XP_029196411.2, DNA replication complex GINS protein SLD5-like [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q99LZ3DNA replication complex GINS protein SLD5 OS=Mus musculus OX=10090 GN=Gins4 PE=1 SV=1
Q499W2DNA replication complex GINS protein SLD5 OS=Rattus norvegicus OX=10116 GN=Gins4 PE=1 SV=1
Q7ZT48DNA replication complex GINS protein SLD5 OS=Xenopus laevis OX=8355 GN=gins4 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007052 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05916
all species →
Sld5GINS complex proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR021151
all species →
DomainGINS subunit, domain AInterproscan
IPR008591
all species →
FamilyGINS complex subunit Sld5Interproscan
IPR038749
all species →
DomainGINS complex protein Sld5, alpha-helical domainInterproscan
IPR036224
all species →
Homologous_superfamilyGINS, helical bundle-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21206
all species →
SLD5 PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006261
all species →
Biological ProcessDNA-templated DNA replicationInterproscan
GO:0000727
all species →
Biological Processdouble-strand break repair via break-induced replicationInterproscan
GO:0000811
all species →
Cellular ComponentGINS complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_022899-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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