Gene detail

Detailed information of FUN_022914-T1 in Acropora pulchra

Genomic Location: ptg000017l:1415248...1425698
NR annotation: XP_015772015.1, PREDICTED: alpha-adducin-like [Acropora digitifera]
Species Acropora pulchra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

FUN_022914-T1

TTCTCAGCGATAAAAGATCCCAGAGCATCAATTATCGAAAATACTGAACATGCCAATATGTCGATGGATAAACAATAAACAACTTGAGGCGAAAAGTTCTGTCAATAGAGTCACCCAAGCTGTTTTGGATCCAAAATGTTTCAAAAGGACCCATTTGTAAATGTTCATCGTCAAATGTCTTTGCTTAGCTCGGGGATATGTTACACTGAGTGTACTGGCAAAGAATAGAATAGCAAGGACTATTTGAGTATGTTATCTGTGCATAATTGTCTTACAATGTCTGGATAGTTAAAATGTTCTTGTGTGTTCTTTTCGTAATTTTCCAAGTGACTTAATTTTAGTTTATCGTCGAAAGCACGTGTATTCAGAAGCAAAATAACAAATGGATTAGTAGTCTTTATATTATATGTCCTTGGAATGTACACTTCACGCTGGCAGAACGAACTTTGACTTTGTATGTGCTTTTGTTATCTTTTTTGTTTTTTATTTTTTTTCAATTCTCAGCTTCTGCCAGAAGATTGTGGCTGCAGAATCCCTCGCAAGCACCATGATCTTTTTGAAAAACCTATTGGCTAACTATGTCCTTTAAAATGGCCTGCCTATATAACAGCTTTAATGCATTCAGTTTTTCTTTTCCCTTCTTTCGCGTTGCGCGCGATCATTTGAGGGTCACCACGTGATACCTTTGAACCAATGAGAAGCAAGATTTTCTCCTAAGCTTCGAGTGTAACGCATGTGCAATAGATGTTACGGGGTCTTTCTGCGCGTGCTTTGGGCGTTTCAAGAAGGTGTGATCGCCATTCAGAAAAAAACGTAATCTCTTCCTTGGCCTCGCTCCCTGAGCCGAATTTGCTAACATGTCGACAGCGAAAGGTAGCAAACCGTTCATGGAAGGTAAATCAAGGAGATTCAGTGCCCCTACTAGAGGCAGAGCAGTTCGAAGGCCTGAAGATGTTGTTCGCGACGTACGCGGTCTCAAGCTTCGCCAGCGTGTTTCGCTTGTGTTAAACGACAAAGTTCTTCGCGATGAGCTCGAAGGTCTTGTTCAGAACTACGTTTCGAATGGTCCTAAAACGAGTGGTGAAGGGATTCGCACCTATCAAGATTTTCTTATTCCATCGAGTACGTACTACGGAGGAGGAATGTCCGCTGTTGTTGCTCCAATCGCAGACATTCGAGGCTCCGATACTTTGAATTATTCCAAGCAAGAAAGATTACTGCGATGTAAGTTGGCGTCGACCTACCGCCTTGTCGACCTATTTGGATGGAATACTAGCATTTACAACTTTATAACTATTCGTCCGTCGACAGATCAAGAGAGTTTCTTGATTCACCCTTTAGGGCTCTTATACAGCGAAGTAACGGCATCCAGTCTGCTAAAAATTAATCCCGATGGAAGTGTTGTCGATCAAGGCAGTACGAATCTCGGCGTGAACCTTGCGGGTATCTTGCTTCACTCGGCGATTCACGGAGCAAGGAAAGATGCGAGAGCAATAATCCACATGCACCAAGAGGATGTCGTTGCTGTGTCAGCTATGAAATGTGGACTTTTGCCACTCTCTATCGAAGCTGCAGAGCTTGGTGAGGTATCCTACCATGATTTCAGAGGTATTTTTACCAATGAGGAAGAAAAAGAATCAATAGTGAAGGACCTTGGTGATAAAAACAAGACCATGATTCTCAGAAACCATGGAATTGTAGTTTGCGGGGAGACAATAGAGGAGGCGATGTACCTTGCTTATGCTTCAGTGAAAGCATGCCAACATCAGGTAAAGGCCATTGGTGCTGGAATTGACAACTTGGTGAAGTGTGATGAATTTGCCATTCAACAAGTTGTGGAGACAGCAAATACTGGTGGTGGTGGGGTGGATTCTGGTAAACTCAAATGGAAAAGAGGAGAGATGGAGTTTGAGGCTTGGATGCGATTGCTGGACTCAATGGGCTATAAAACCGGGTATGTTTTCAAGAATCCTGAGATATTTCATAGTGAAAAGCCAGCTGAAAGAGAAGTAACAACACCATCAACAGTTTCTAGCACTCGAGCTAAAATGTTCTACACACCAGAGATTGAACGAAATCCAGTGAGGAGATCTCATTCCACAGGCCGTGCCAATACCTACAGGAACCGTGTTAAGTGGCTCAATACTCCTGTCAAATCAACTGAATACAAGAAAGATAAGGAGAAGGTTGAACTTGACAGTGATGAGCCTGTTACAATTAAAGATCTCATGCCTGAAAGAGTAGATAAAGATATTGATCAGCAAGAGGAAGCGGTTGTGAAGACAACAAAAGTTGTGATCACTGAGTCCTCGTCGCATGAAAAGGGAATGAATGGTGATGAGACGAAAGAAGTGAAGAAAGTGGTGATCACAGAGGTGAATGGTGATGCAGGTGACGAGAAAAGCATTGATGATGGTGATGAAGATGGCCCAGATGGAGAGCTCTTGATGCCAACAACAGATGGCTCAGAGAGCCCGACAAAAAAGAAGGGAACCAAAGTCAAAAAGAAGAAGAGCTTCAGAGATGCTTTGGTCAAGAAATTTAGCAAGAAGGGTGAGCGGCCAGCCAAGTATGTGAAGAATGAAGGAGAGAAAAATGCTGATTCTGCAGAGTAGATATGAACGCTGGGTGAGAGTCAAATTATAAGTTGGCGTTAGGTTGCTTTAAGTGCAATCACGTCATTGGGAATCTTGAAATGGAAAAAATACAAAACAAAAAACAATCCAAATCAACTTGTTTTACAAATGTATAAAGTTGTGAAGTTGTTGAATGGCTGATCGTCAACAAGAAACTGCAGTGAAAAGTTTAAGATTAATAACTCTTTGTTACTTTGTATTCCTAACTGCCCACACTGTAATTTCAAGGGAGAACTAAGGATAGGATTTTTTTACTTTGTTTTAGCTGAAAACTAAGATCCCTATCTCAAAAGGAACCAAATTACAAAGAAATCATGTTTATCAATATTAGTTTGGCAGTGGCAAAACCAGAGTTTTCTTTGTAGTGTTTAGGCTAGCAGGTTCAATGTGGATTTTTAAATCATTCTATTGCTGTATATGAGATTTGGTAATTTTTAGTTGTAAGTACTTATTTTCTTGTTGGGACAAATGTGTAGGAGAAACCTTCTTATTTCTGTATATCGATAATACATGTATGAATGAACGTTTCTTGTTTCATTTCTAATGTAATAGCTTTCAAAGGAGAAGGGTGCCCTGGGTGGTTGGGGATAAGGAGTGCATTGGTTGAGAAATCTAGGTGATGATGTAAACACTTTCAGTTCATGGGACAATTAACCCTGTGGGTTATCTCTAGTTATTCAGCATTACATTTAAGGAACCCTTCAACATTTGAGTCAGTACAAAGGCTGTGATTGCACTTTTATCATGATTAGTTTAGTTATGTCATGGCAAGGATTCTTTTCCTCTCAAATTTGTTGTGAAGGGATTCATGTTTTTCAAGATGGGAAGATGATATCCTAATTATTATTGATGTCATTTTTTTTTCTGCTAACTCGTGAAAATTAAATTATCTGTAAACCGAGGGGTCCAAGAGAAAATTATCTTAATAAGGACCTTTTTGAGGGCTTAAGAAAAATCCAGCTAAAATTGATTTGCACTATGACTTAGCTACCAATATTCATTTGAGTCTCAAGATATCGAGTTGCAAGTTATTCATAACGTGTGGACCAACTA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q63028	Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2
Q9QYC0	Alpha-adducin OS=Mus musculus OX=10090 GN=Add1 PE=1 SV=2
P35611	Alpha-adducin OS=Homo sapiens OX=9606 GN=ADD1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002623 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00596 all species →	Aldolase_II	Class II Aldolase and Adducin N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001303 all species →	Domain	Class II aldolase/adducin N-terminal	Interproscan
IPR036409 all species →	Homologous_superfamily	Class II aldolase/adducin N-terminal domain superfamily	Interproscan
IPR051017 all species →	Family	Aldolase class II Adducin subfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10672 all species →	ADDUCIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005856 all species →	Cellular Component	cytoskeleton	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0014069 all species →	Cellular Component	postsynaptic density	Interproscan
GO:0051015 all species →	Molecular Function	actin filament binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K18622	ADD; adducin	-	Cytoskeleton proteins	ko04812	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.