Detailed information of FUN_022990-T1 in Acropora pulchra

Genomic Location: ptg000017l:2300955...2304924
NR annotation: XP_015758577.1, PREDICTED: ubiquitin domain-containing protein 2-like [Acropora digitifera]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5EAE3Ubiquitin domain-containing protein 2 OS=Bos taurus OX=9913 GN=UBTD2 PE=2 SV=1
Q640W6Ubiquitin domain-containing protein 1 OS=Xenopus laevis OX=8355 GN=ubtd1 PE=2 SV=1
Q8WUN7Ubiquitin domain-containing protein 2 OS=Homo sapiens OX=9606 GN=UBTD2 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008889 (this species only) · gene tree & orthology
Ubiquitin familyULD|UBL|NEDD8 · all ubiquitin genes in this species
Ubiquitin familyULD|UFD/UBQ|UBQ_Other · all ubiquitin genes in this species
Ubiquitin familyULD|UFD/UBQ|UBQ_PIM · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00240
all species →		ubiquitinUbiquitin familyDomainInterproscan
PF16455
all species →		UBDUbiquitin-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000626
all species →		DomainUbiquitin-like domainInterproscan
IPR032752
all species →		DomainDC-UbP/UBTD2, N-terminal domainInterproscan
IPR029071
all species →		Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR019956
all species →		DomainUbiquitin domainInterproscan
IPR039869
all species →		FamilyUbiquitin domain-containing protein 1/2Interproscan
IPR038169
all species →		Homologous_superfamilyDC-UbP/UBTD2, N-terminal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13609
all species →		UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_022990-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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