Gene detail

Detailed information of FUN_023008-T1 in Siderastrea siderea

Genomic Location: contig_21:4214153...4254936
NR annotation: no NCBI-NR hit recorded
Species Siderastrea siderea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

FUN_023008-T1

ATGTTTGGATCTACTACGAATACACCGTTTGGAACCGGCAGTGGCTTTGGAACAGGAACAACTTTTGGAAGTCAGAGTGCGGGAACACAGTTTGGGACAAGTTCAGCTCTAGGCTCAAGCTTGTTTGGAGGCAAGACACAGACAGCCTTTGGTACTACATTTAATCAGCCCCAGAGTTCAGGTACCACTGGACTGTTTGGAAGCACAACCACAAATACAGGAGGAAGTTTATTTGGAGGAGGAACAACAGGAAGCATTTTTGGACAGCAACCAACTTCACAAGCTTCATTTCCTGGTTTTGGGACAAGTGGGACCAGTTTATTTGGAAGTACAGCAAAAAGCACCACAGGCACAAGTGTTTTCCAGACACCTGGACAAACATCCACTTTTGGGACAGGAACGTCAACTGGATTTGGAACGACTGGTTCCAGTCTGTTTGGCAGTGGTGTAAATACTAGTACCGGTCTGTTTGGTGCTGGTCAGCAGACCTCCTCTTTGTTTGGTCAGACTAGTACTGCTTCAGGTTTTCAAGGATTAGCGTCTTCTGCCACCACAACCACTGGAACACCTATCAAGTTTAGCGTTGTTACAGGGACTGACCCTATGGTAAAAAATGGCATCACCACCAACATCAGCATTAGACATCAGTGTATTACTGTCATGCCAAACTATGAGAAGAAGTGTTTAGAGGAGCTAAGAATTGAAGATTATGAAGCTGGACGTAAATCTGGAGCTACTGGCTCAACTGGTTTTACTGGTTTGCCAACAAGTACAAGTTCAGCAGGGGGTCTGTTTGGAGCTACGTCAACAGGATTTGGAACAACGTCCACCTTTGGACAGAAACCAGCCACTGGATTTGGAACATCTGGAAGCTTGTTTGGTGGTACCACGACTCCTTCCCTGTTTGgccaacagcaacaacaaacaacaggTTCACTGTTTGGTCAGAAGCCAGGAGGCTTGTTTGGAACACCAACATCGAGTACAACGTCAACTGGGTTTGGTACAGGATTTGGTGCAGGGGCATCTACTGGTCTTTTTGGACAGAGCTCTGCTGGACAGACGACTAGTCTGTTTGGTGCACCAACAACGTCCACTTCCACTGGTTTGTTTGGAGCTCAACCCACAGGTTTTGGTCAGGCACAAACTGGCACTGCGTTGTTTGGACAATCAGGGTTTGGACAGCCACAACAACAGtcAACACTTTTTGGAGGCAAGGGATTTGGAACAACCTTAGGTACTGGAACAACTGGTGGGTTATTTGGGCAGCAGAATAAACCCCAAACAGGATTTAACTTTGGCACCAGCACTGGGGGCCTAGGGACAAGTGCATTTGGGACAACAACCAGCACAACAGGAGGCCTGTTTGGTGCAAAGCCCACTGGGTTTGGTACAGGGACGGCATTTGGTACCGGTACAGGCACAGGGCTCTTTGGTGGCACAGGAACACTAGGCATGGGAACAGGATTAGGCACAGGGACACTAGGAACTGGTGCTTTTGGTGCTCTGGGAACTCAACaaacaactggtcttggaatagGCACACTTGGAAGCACCCAAAATACAGCACTGAATACtttacagcaacaacaacaacagcagctaCTAGAACAGCAGCTCCAGATTCTGGCCAACTCTCCATTTGGTGACTCACCACTCTTTAGGAATTCACTAGTGgAGAAGGCCAGGACAGATAGAGCAGCAGGATCTACTTCAAGTTCTGTTCAGAAGATTTCCACCACCCCATCACATTATAAGGTTTCTCCTCGCCCAGCGGCCAGAATTAAACCAAGACCAATCAATAATCACACTATGAATAAGTCCAAGCTGTTTGAAGGGCTTGAGGAGGATTCTGGCTTGAGTCCTGACACTTTTGTACCCAGGAAGAACATCAAGAAACTTGTTATTAAGAACAAGTCTGTCGCAGAGGATTCACCCATGTCAGTAGTTGACACAACCAGGGTCAAACTGCACTCCTTGGAGGGAGATGAAGACTTGCCAGTGATGAGCTCCCctttccctccctcccctccctcatCACAACATACATCACCTGTGAGAAGCTCCACTGTTCCTGAGGGGGAGAGGAGTGAGAAGACTGCTGATGATAGGGTCAATACCAGTGACAGTACAAGTCCGATTGGAGTGAGGTTCTCCCAAGCTGCGACAAGAGAACCCTTGGATACCACCATTGTTGATTTGAATGTACGCCGTGTTACAAGGCCGGATGATGATCAGGAAAGCTTGCAGAGTTCGAAGGTGGCAGAAGATGATGCTTCTGATGGTGGGCCTAGAGAACTGTGTGGTataattttgaaaagGTCAGAATACTATACCATACCACCATTGAGCAAACTCAACCAGATGATTGACAGCAATGGAGATGTTTTTGTTGATGACTTTGTTGTTGGTCGGGAAGGTTATGGCCAAGTCAAGTTTTATGGCAGAACCAATGTGGCTGGACTGAACTTGGATGAAATTGTGTTCTTCAGGCGTCGTGAGATAGAGGTTTATCCAGACTCGTATCCTAACAAGCCACCAGTTGGCGAGCAGCTCAACAAGAAAGCTGAAATCACTCTGGAGAAAGTTTGGCCAAATGACAAGACTTCTCACAAACCAATAACAagtCCAGAAAGACTGAAGCTTCAAGGATGGCAACAAAGAGTGGAAGCTGCCACAGCAAAACTTGGAGCCACTTTCCTTGATTATGACCCCGACAGTGGAAACTGGGTTTTTACGGTAGAGCACTTTACGCGATATGGAATGCATGAGTACCTTGATGATGAGCAGCTGGCAAAGAAGCTGAAGAGACCTCCCCTCAAACCACAAGTGCAGGACATTGGTGACTctgtggaaaaagaaaaacttgaaaTCTTCAGGCATCTTCAAGAAAAGAAACAGCAACTTGAAGCTTATGAGAAGGAAAAGCAAAGAGCTGCTTTGTCTTTACAAGATCAGGACAGTGACATGGCAGACATCGATCATGAAACCTTTCCAGaGGAAATGCTAGAAGAAGCAGGAGGGGAAGAAAGTGATGCTGATGAAGAAGAACTTGATAATTCACCTGCCAGTCACCAGCTAGCGACGGCACTGGGTATGAATGCACAGAGGATCCAGGTCATGAAGGCATCATTCTTTGCTGATCAGCCTCAGCCCTCATCAGTGCACTTGCCCAAGGATGGCCCTTCTGTTGACAAGTCCCTTTTGAGTGCATCCTTTGGTAAAGCTGGGCACGCTAAGAGCTCTGTGTATCCCGCTGTCATGCCGCTAGGACCTTTGCTATCTCCCAAGGTCCAGCGTCTTGTGGATGAGTCAGCTGCTGGCCCACCGCAGCTGTCACAATCACTGTTCGGCAGCCCTAAGATAGGTGTTTATCCTCTCAGACACCCTGTGGTCCATGATGTTACCCCAGCTGCCCCGCCCTCTCCAATGCTTCTTCCAAGTGCTATTGGTACAGCAATGGACATCGGAATAAAAGTAGTTGGAGCCCGCAATCAGTTTGGTTTGGTCCCTAAAGAGGACTCCCTTGTCGACAGCAAGGAGAATCTTGTAGGTGATGCTGGCCTGATGCTGGGACGCTCCTTTCGTGTTGGCTGGGGGCCAGGGTATGTCTTGGTCCATAGCGGTACACCTCTGGGGAAACAAGAGAGGCAGCCTACAGCTTCCACCACCCACACTTCCCTTGTGGGTGATTTCTTGATGCCAAAGCCGCGGCCCATCGATGGTGCTCCAGCATTTGGTGTGACATTAGAGAAGCTGAATGTGGCTACACACTTTAGTCATGGCAGTGATACTGTGCTGGCACAGCATCAGTCCATGCTTGAAACAGAATTACAGCATGCCTTGGTGTCTGTTGAACATGGCTGTCCATTCTTTCGACCCTCAACTGATCTTAAAGCACTACATCATCATGCTGAAGTTGCCAGGAAAAACAAGGAAGCTACAGACCCAGGGCCACTGAGAGAAGCAGCTGAACAGAAATGTTTGGTTTGGGATCTAGTTGTTGCTCTTTGGGGCAAACTTAAAGAAGACCAAGAAGATAAAGAAGCTTTACCCAGCACTGCAGAGGATCGAGAAGCCTACCAAACTCGTGTCGCCAGAAAAGCAGCCTTGTCCAACTGGCTAGCTGAAGCTGCAAAGACGAAAATCTCCCAAGAGGTTGATTCAGCTAATTTCCAGGAAAGTGATCACTTGAAGTCTATCTTCAGTTCTTTGACCGGGAAGCAGATCAGTAAAGCGTGCCATGTGGCCCAACAGCATGGTGATTATCGACTGTCTCTTCTGCTGTCACAAGTTACAGGAAACTCAGTGACACGAAATCTTATCTACAAACAGCTTAGTGATTGGCAGGAAATGAAGGCAGACATGTTCATTAATGAAGAGCGAATAAAAATCTACGCTCTGCTTGCGGGCATAATGGTGTGGTCGTTGTCACGTGACACCACCAATCTGTCACGTGATGAGCTTAGAGCTCATGTGGTGAACGTCTGCGAGGGACTGGATTGGAAAAGAGTTTTAGCTGTTCACTTGTGGTATTACTGTTCACCAACGTCCTCAATACAAGATGCTTTGAAAGCGTATGAAGTCTCTTTTAAGGGAAGGTCAAGTAACGGTAAATACGGTGCGCCTCCGAAGCCGCCATTTATGGAAGAAAATGAAGAGGATGAACACGAGGATGAAGAAAACAAGTTTGTGACAAGAGATACGTGCTATCATTTGTTAAAACTCTACTGCAAGCGATCACACAGACTGGAAAGGCTTCTATCGCCATCCACTTCCACTGCTCATCAGCTGGATTTCAGTTTGAGCTGGCATCTTTATCAGGTCCTTGAATCCCTTCAGTACACACATCTCTCCCAGGACCACGCGGGCATGTTACATAGTGGCTTTGCTGCTCAGCTAGAGGGACTGGGTCTTTGGCACTGGGCTGTATTCGTGTTGTTACATATTCAAGACCCAGTGAGGCGAGAGCATGCTGTCCGTGATCTTCTTTGTCGCTTCTGCTGTTTATCAACTGATCACGGGAATGTAGAAAAAGAACGTTTCTTGATAGAACATTTAAAAATTCCCGCTGAGTGGATACATGAGGCAAAGGCTCTGCGGGCGCGCTATGAAGGCCGAACTCGCGAGGAAGCTTTTCACCTTGTGAAGGCGCGGCATTGGAGCCTGGGACATAATGTTGTTCTTCGCAGCCTTGTTAGTGACGCAATTATAAATGCGGAATACGACATTTTGAAAACGTTGCTCGGAGAAATGGAAGCGAGGGATCGTAGCTCCACCGTGAAGGACTGGGCGACAGGAGGACAGGTGTTTTTGGATTATCTGGTTCTCATGGAAAAGTTCCAAGACATTGCAAAGGGTAAACTTGTACCAACCAAGTATGATTTTGAGGACATACACATGGAGGTATCTTCTCTTTGTACGAGAATCAACAGCTTACCGTCAGATACAACAAAGGACATGTTGTGCCAGTACGACATGGCTAAGATGTGCGCTAATTTCCTGAAGATTGTCATGAGGGAACTGACGGATGTCACCGATGAAGGGGAGGCCCGTTTACCGACCCACATCCTAGCCCCTCACGTGACCAGGCTACCGATGCCCGAGGACTGTGCTCTTGCAGAACTGCGTCAGCTTATTCCCAATTACATTACGGAAATAACCGCTGGCCATTGA

Transcript

FUN_023008-T1

CAGTTTATGGCgctttagttttccttgttatATCCCTCGTAATATTCCGAAAATACTCTTGTTCGTTTATAAAACGATCGTCGATTGGATGCACTGATATTCAGCGAGAACATAGCTTCACAAAAGTATTTGCTGTGATGGACCTCAAAGCAGATATCCTCATCTAAAGTGCGCCTTATTATCTCACGTGTTGATTCTCAAGTGTGAATCCTCTTCCGCTTCCATCGATTGGTGAGCTACATACCTTCGGCTTAGATTGTGTGGATCGGCTTTCAAGATGTTTGGATCTACTACGAATACACCGTTTGGAACCGGCAGTGGCTTTGGAACAGGAACAACTTTTGGAAGTCAGAGTGCGGGAACACAGTTTGGGACAAGTTCAGCTCTAGGCTCAAGCTTGTTTGGAGGCAAGACACAGACAGCCTTTGGTACTACATTTAATCAGCCCCAGAGTTCAGGTACCACTGGACTGTTTGGAAGCACAACCACAAATACAGGAGGAAGTTTATTTGGAGGAGGAACAACAGGAAGCATTTTTGGACAGCAACCAACTTCACAAGCTTCATTTCCTGGTTTTGGGACAAGTGGGACCAGTTTATTTGGAAGTACAGCAAAAAGCACCACAGGCACAAGTGTTTTCCAGACACCTGGACAAACATCCACTTTTGGGACAGGAACGTCAACTGGATTTGGAACGACTGGTTCCAGTCTGTTTGGCAGTGGTGTAAATACTAGTACCGGTCTGTTTGGTGCTGGTCAGCAGACCTCCTCTTTGTTTGGTCAGACTAGTACTGCTTCAGGTTTTCAAGGATTAGCGTCTTCTGCCACCACAACCACTGGAACACCTATCAAGTTTAGCGTTGTTACAGGGACTGACCCTATGGTAAAAAATGGCATCACCACCAACATCAGCATTAGACATCAGTGTATTACTGTCATGCCAAACTATGAGAAGAAGTGTTTAGAGGAGCTAAGAATTGAAGATTATGAAGCTGGACGTAAATCTGGAGCTACTGGCTCAACTGGTTTTACTGGTTTGCCAACAAGTACAAGTTCAGCAGGGGGTCTGTTTGGAGCTACGTCAACAGGATTTGGAACAACGTCCACCTTTGGACAGAAACCAGCCACTGGATTTGGAACATCTGGAAGCTTGTTTGGTGGTACCACGACTCCTTCCCTGTTTGgccaacagcaacaacaaacaacaggTTCACTGTTTGGTCAGAAGCCAGGAGGCTTGTTTGGAACACCAACATCGAGTACAACGTCAACTGGGTTTGGTACAGGATTTGGTGCAGGGGCATCTACTGGTCTTTTTGGACAGAGCTCTGCTGGACAGACGACTAGTCTGTTTGGTGCACCAACAACGTCCACTTCCACTGGTTTGTTTGGAGCTCAACCCACAGGTTTTGGTCAGGCACAAACTGGCACTGCGTTGTTTGGACAATCAGGGTTTGGACAGCCACAACAACAGtcAACACTTTTTGGAGGCAAGGGATTTGGAACAACCTTAGGTACTGGAACAACTGGTGGGTTATTTGGGCAGCAGAATAAACCCCAAACAGGATTTAACTTTGGCACCAGCACTGGGGGCCTAGGGACAAGTGCATTTGGGACAACAACCAGCACAACAGGAGGCCTGTTTGGTGCAAAGCCCACTGGGTTTGGTACAGGGACGGCATTTGGTACCGGTACAGGCACAGGGCTCTTTGGTGGCACAGGAACACTAGGCATGGGAACAGGATTAGGCACAGGGACACTAGGAACTGGTGCTTTTGGTGCTCTGGGAACTCAACaaacaactggtcttggaatagGCACACTTGGAAGCACCCAAAATACAGCACTGAATACtttacagcaacaacaacaacagcagctaCTAGAACAGCAGCTCCAGATTCTGGCCAACTCTCCATTTGGTGACTCACCACTCTTTAGGAATTCACTAGTGgAGAAGGCCAGGACAGATAGAGCAGCAGGATCTACTTCAAGTTCTGTTCAGAAGATTTCCACCACCCCATCACATTATAAGGTTTCTCCTCGCCCAGCGGCCAGAATTAAACCAAGACCAATCAATAATCACACTATGAATAAGTCCAAGCTGTTTGAAGGGCTTGAGGAGGATTCTGGCTTGAGTCCTGACACTTTTGTACCCAGGAAGAACATCAAGAAACTTGTTATTAAGAACAAGTCTGTCGCAGAGGATTCACCCATGTCAGTAGTTGACACAACCAGGGTCAAACTGCACTCCTTGGAGGGAGATGAAGACTTGCCAGTGATGAGCTCCCctttccctccctcccctccctcatCACAACATACATCACCTGTGAGAAGCTCCACTGTTCCTGAGGGGGAGAGGAGTGAGAAGACTGCTGATGATAGGGTCAATACCAGTGACAGTACAAGTCCGATTGGAGTGAGGTTCTCCCAAGCTGCGACAAGAGAACCCTTGGATACCACCATTGTTGATTTGAATGTACGCCGTGTTACAAGGCCGGATGATGATCAGGAAAGCTTGCAGAGTTCGAAGGTGGCAGAAGATGATGCTTCTGATGGTGGGCCTAGAGAACTGTGTGGTataattttgaaaagGTCAGAATACTATACCATACCACCATTGAGCAAACTCAACCAGATGATTGACAGCAATGGAGATGTTTTTGTTGATGACTTTGTTGTTGGTCGGGAAGGTTATGGCCAAGTCAAGTTTTATGGCAGAACCAATGTGGCTGGACTGAACTTGGATGAAATTGTGTTCTTCAGGCGTCGTGAGATAGAGGTTTATCCAGACTCGTATCCTAACAAGCCACCAGTTGGCGAGCAGCTCAACAAGAAAGCTGAAATCACTCTGGAGAAAGTTTGGCCAAATGACAAGACTTCTCACAAACCAATAACAagtCCAGAAAGACTGAAGCTTCAAGGATGGCAACAAAGAGTGGAAGCTGCCACAGCAAAACTTGGAGCCACTTTCCTTGATTATGACCCCGACAGTGGAAACTGGGTTTTTACGGTAGAGCACTTTACGCGATATGGAATGCATGAGTACCTTGATGATGAGCAGCTGGCAAAGAAGCTGAAGAGACCTCCCCTCAAACCACAAGTGCAGGACATTGGTGACTctgtggaaaaagaaaaacttgaaaTCTTCAGGCATCTTCAAGAAAAGAAACAGCAACTTGAAGCTTATGAGAAGGAAAAGCAAAGAGCTGCTTTGTCTTTACAAGATCAGGACAGTGACATGGCAGACATCGATCATGAAACCTTTCCAGaGGAAATGCTAGAAGAAGCAGGAGGGGAAGAAAGTGATGCTGATGAAGAAGAACTTGATAATTCACCTGCCAGTCACCAGCTAGCGACGGCACTGGGTATGAATGCACAGAGGATCCAGGTCATGAAGGCATCATTCTTTGCTGATCAGCCTCAGCCCTCATCAGTGCACTTGCCCAAGGATGGCCCTTCTGTTGACAAGTCCCTTTTGAGTGCATCCTTTGGTAAAGCTGGGCACGCTAAGAGCTCTGTGTATCCCGCTGTCATGCCGCTAGGACCTTTGCTATCTCCCAAGGTCCAGCGTCTTGTGGATGAGTCAGCTGCTGGCCCACCGCAGCTGTCACAATCACTGTTCGGCAGCCCTAAGATAGGTGTTTATCCTCTCAGACACCCTGTGGTCCATGATGTTACCCCAGCTGCCCCGCCCTCTCCAATGCTTCTTCCAAGTGCTATTGGTACAGCAATGGACATCGGAATAAAAGTAGTTGGAGCCCGCAATCAGTTTGGTTTGGTCCCTAAAGAGGACTCCCTTGTCGACAGCAAGGAGAATCTTGTAGGTGATGCTGGCCTGATGCTGGGACGCTCCTTTCGTGTTGGCTGGGGGCCAGGGTATGTCTTGGTCCATAGCGGTACACCTCTGGGGAAACAAGAGAGGCAGCCTACAGCTTCCACCACCCACACTTCCCTTGTGGGTGATTTCTTGATGCCAAAGCCGCGGCCCATCGATGGTGCTCCAGCATTTGGTGTGACATTAGAGAAGCTGAATGTGGCTACACACTTTAGTCATGGCAGTGATACTGTGCTGGCACAGCATCAGTCCATGCTTGAAACAGAATTACAGCATGCCTTGGTGTCTGTTGAACATGGCTGTCCATTCTTTCGACCCTCAACTGATCTTAAAGCACTACATCATCATGCTGAAGTTGCCAGGAAAAACAAGGAAGCTACAGACCCAGGGCCACTGAGAGAAGCAGCTGAACAGAAATGTTTGGTTTGGGATCTAGTTGTTGCTCTTTGGGGCAAACTTAAAGAAGACCAAGAAGATAAAGAAGCTTTACCCAGCACTGCAGAGGATCGAGAAGCCTACCAAACTCGTGTCGCCAGAAAAGCAGCCTTGTCCAACTGGCTAGCTGAAGCTGCAAAGACGAAAATCTCCCAAGAGGTTGATTCAGCTAATTTCCAGGAAAGTGATCACTTGAAGTCTATCTTCAGTTCTTTGACCGGGAAGCAGATCAGTAAAGCGTGCCATGTGGCCCAACAGCATGGTGATTATCGACTGTCTCTTCTGCTGTCACAAGTTACAGGAAACTCAGTGACACGAAATCTTATCTACAAACAGCTTAGTGATTGGCAGGAAATGAAGGCAGACATGTTCATTAATGAAGAGCGAATAAAAATCTACGCTCTGCTTGCGGGCATAATGGTGTGGTCGTTGTCACGTGACACCACCAATCTGTCACGTGATGAGCTTAGAGCTCATGTGGTGAACGTCTGCGAGGGACTGGATTGGAAAAGAGTTTTAGCTGTTCACTTGTGGTATTACTGTTCACCAACGTCCTCAATACAAGATGCTTTGAAAGCGTATGAAGTCTCTTTTAAGGGAAGGTCAAGTAACGGTAAATACGGTGCGCCTCCGAAGCCGCCATTTATGGAAGAAAATGAAGAGGATGAACACGAGGATGAAGAAAACAAGTTTGTGACAAGAGATACGTGCTATCATTTGTTAAAACTCTACTGCAAGCGATCACACAGACTGGAAAGGCTTCTATCGCCATCCACTTCCACTGCTCATCAGCTGGATTTCAGTTTGAGCTGGCATCTTTATCAGGTCCTTGAATCCCTTCAGTACACACATCTCTCCCAGGACCACGCGGGCATGTTACATAGTGGCTTTGCTGCTCAGCTAGAGGGACTGGGTCTTTGGCACTGGGCTGTATTCGTGTTGTTACATATTCAAGACCCAGTGAGGCGAGAGCATGCTGTCCGTGATCTTCTTTGTCGCTTCTGCTGTTTATCAACTGATCACGGGAATGTAGAAAAAGAACGTTTCTTGATAGAACATTTAAAAATTCCCGCTGAGTGGATACATGAGGCAAAGGCTCTGCGGGCGCGCTATGAAGGCCGAACTCGCGAGGAAGCTTTTCACCTTGTGAAGGCGCGGCATTGGAGCCTGGGACATAATGTTGTTCTTCGCAGCCTTGTTAGTGACGCAATTATAAATGCGGAATACGACATTTTGAAAACGTTGCTCGGAGAAATGGAAGCGAGGGATCGTAGCTCCACCGTGAAGGACTGGGCGACAGGAGGACAGGTGTTTTTGGATTATCTGGTTCTCATGGAAAAGTTCCAAGACATTGCAAAGGGTAAACTTGTACCAACCAAGTATGATTTTGAGGACATACACATGGAGGTATCTTCTCTTTGTACGAGAATCAACAGCTTACCGTCAGATACAACAAAGGACATGTTGTGCCAGTACGACATGGCTAAGATGTGCGCTAATTTCCTGAAGATTGTCATGAGGGAACTGACGGATGTCACCGATGAAGGGGAGGCCCGTTTACCGACCCACATCCTAGCCCCTCACGTGACCAGGCTACCGATGCCCGAGGACTGTGCTCTTGCAGAACTGCGTCAGCTTATTCCCAATTACATTACGGAAATAACCGCTGGCCATTGACACTGCAGGGTGTGAAAAGGAAAAACTCCGGGTTGAAGTGTCTGAACAAGTTGGGAATGTTTCAGCTGCAATACGAAACAGGCATTTGCTTTgaataaaagcaaaaacaaaacaagcgaATGGAAGGATAACTGCAGCCCTAgtggtttgcaaaacaaaccgtGCAAGGAAGTTCAGTTTCTTGTTGGAAAATTTGAAGACGTTTGCTCGTTTGAGATGACTGAAAGAACGGTATATATCACGATATGTATCACTCTTCCATGTGAAGAATAACAGGGACTAATACGGTGTACATGGACAATCAGTAAGTGGTATTACAAGATGGCGTGGGAATTCATGCATGATATTTCGATATATCACCAGTAATCAGACGGAATTGTAGATAAAAACGGTTTCCGTTGAATATTGTCTTCTTTTGACTTGCATGTTAGCCCGCTGCTTTAGTCAgcaatattttgtaattttcgATGGCGCAAGTAGAATGACTTAATATCTACTCGTGGCAACTGTGTTACTAGTATGCTACATTTTCTGTAAGCAGCGATTCGAATCACCTGCAAATATTTGGAATTTTCAACGGTCAAATGTACACAGATTTTCGACTGGCTAACGATGAAGCACGTATAATCTATTGAGTCAATTATAGAGTAACTGTAAAGATGAGTGAAGGAACTTTCTTCTTAGCCAATCAACTGGCTTGCGATATCATTTCGCGCTTTCTGTCAAGTGTAGGTGCTTAGTTCGACTCGAAAATGTGAAATAAACTGACAAACAAAAGAGAAGAAACGAGCACAGAAATCGATATAGAAATCGCAAATGTAGGTAACTGTAAATTTCTGttgactgtttttgttttgttttgttttgtttgtttgtttgtttttttggcaCTTCCATTTTCACTTCCTTTTGAAGTATTGGGCTCTTTGCACAAccaaaataacaataaatgaCCTTAAAGCCGTGTGTCACTCTCTTAGAATGTTTAGGTACAAATTGGAAAAATTTATTTCAATCGGAGAAGAATTATCAAAGAAACAACAACACTgggaagtactgctcaggaaaattaatttgaatggtcgcacttcaggatttcatccacgttGAACCACGTTG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12110 all species →	Nup96	Nuclear protein 96	Domain	Interproscan
PF21240 all species →	Nup98_GLEBS	Nup98, Gle2-binding sequence	Domain	Interproscan
PF04096 all species →	Nucleoporin2	Nucleoporin autopeptidase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR021967 all species →	Domain	Nuclear pore complex protein NUP96, C-terminal domain	Interproscan
IPR007230 all species →	Domain	Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain	Interproscan
IPR036903 all species →	Homologous_superfamily	Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain superfamily	Interproscan
IPR037665 all species →	Family	Nucleoporin peptidase S59-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23198 all species →	NUCLEOPORIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005643 all species →	Cellular Component	nuclear pore	Interproscan
GO:0006913 all species →	Biological Process	nucleocytoplasmic transport	Interproscan
GO:0017056 all species →	Molecular Function	structural constituent of nuclear pore	Interproscan
GO:0000973 all species →	Biological Process	post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0006405 all species →	Biological Process	RNA export from nucleus	Interproscan
GO:0006606 all species →	Biological Process	protein import into nucleus	Interproscan
GO:0008139 all species →	Molecular Function	nuclear localization sequence binding	Interproscan
GO:0034398 all species →	Biological Process	telomere tethering at nuclear periphery	Interproscan
GO:0044614 all species →	Cellular Component	nuclear pore cytoplasmic filaments	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14297	NUP98, ADAR2, NUP116; nuclear pore complex protein Nup98-Nup96	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of FUN_023008-T1 across 85 RNA-seq samples of Siderastrea siderea. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

85Samples

62TPM > 0

7Conditions

142.0Max TPM

47.8Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
holobiont · low.pH_high.temp	20	17	50.19	105.43
holobiont · low.pH Control.temp	20	10	25.81	102.27
holobiont · control.pH_high.temp	20	16	58.45	141.96
holobiont · control.pH Control.temp	19	13	62.66	135.24
Whole organism	4	4	33.25	34.52
unannotated	1	1	26.47	26.47
live coral tissue/skeleton	1	1	24.93	24.93

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR22214419	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	105.43
SRR22214406	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	103.97
SRR22214421	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	83.76
SRR22214408	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	83.25
SRR22214423	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	74.77
SRR22214418	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	74.46
SRR22214414	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	68.01
SRR22214420	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	53.92
SRR22214409	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	53.81
SRR22214404	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	46.03
SRR22214417	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	45.74
SRR22214412	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	45.57
SRR22214410	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	44.28
SRR22214413	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	42.41
SRR22214407	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	41.68
SRR22214415	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	24.55
SRR22214402	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	12.15
SRR22214403	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	0.00
SRR22214405	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	0.00
SRR22214416	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	0.00
SRR22214441	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	102.27
SRR22214436	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	77.81
SRR22214442	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	65.36
SRR22214426	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	52.64
SRR22214428	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	51.52
SRR22214430	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	44.98
SRR22214429	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	42.20
SRR22214425	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	35.14
SRR22214443	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	30.67
SRR22214439	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	13.58
SRR22214424	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214427	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214431	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214432	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214434	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214435	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214437	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214438	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214440	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214445	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214463	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	141.96
SRR22214464	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	111.27
SRR22214465	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	105.36
SRR22214453	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	100.59
SRR22214467	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	96.46
SRR22214450	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	90.59
SRR22214458	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	65.08
SRR22214462	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	62.21
SRR22214459	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	61.94
SRR22214447	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	59.73
SRR22214448	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	53.80
SRR22214454	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	51.73
SRR22214456	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	51.11
SRR22214446	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	47.22
SRR22214461	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	43.14
SRR22214460	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	26.76
SRR22214449	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	0.00
SRR22214451	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	0.00
SRR22214452	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	0.00
SRR22214457	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	0.00
SRR22214547	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	135.24
SRR22214535	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	117.41
SRR22214471	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	112.51
SRR22214548	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	111.73
SRR22214468	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	111.55
SRR22214466	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	100.56
SRR22214506	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	81.66
SRR22214481	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	80.04
SRR22214411	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	78.27
SRR22214400	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	76.49
SRR22214444	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	70.07
SRR22214469	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	64.53
SRR22214422	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	50.42
SRR22214433	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	0.00
SRR22214455	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	0.00
SRR22214470	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	0.00
SRR22214492	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	0.00
SRR22214524	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	0.00
SRR22214546	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	0.00
SRR14295604	Whole organism	Whole organism	not recorded	not recorded	SRP315757	34.52
SRR14295603	Whole organism	Whole organism	not recorded	not recorded	SRP315757	32.98
SRR14295601	Whole organism	Whole organism	not recorded	not recorded	SRP315757	32.86
SRR14295600	Whole organism	Whole organism	not recorded	not recorded	SRP315757	32.64
ERR12861049	unannotated	not recorded	not recorded	not recorded	ERP159209	26.47
SRR12454619	live coral tissue/skeleton	live coral tissue/skeleton	not recorded	not recorded	SRP277390	24.93

Source: CnidoSite RNA-seq expression matrices (SSIDE_TPM, StringTie quantification over 85 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.