Gene detail

Detailed information of FUN_023296-T1 in Acropora pulchra

Genomic Location: ptg000017l:6022967...6027839
NR annotation: XP_044173243.1, stimulator of interferon genes protein-like [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A0A2B4SJA1	Stimulator of interferon genes protein 2 OS=Stylophora pistillata OX=50429 GN=STING2 PE=3 SV=1
A0A2B4SII1	Stimulator of interferon genes protein 7 OS=Stylophora pistillata OX=50429 GN=STING7 PE=3 SV=1
A0A2B4SES9	Stimulator of interferon genes protein 3 OS=Stylophora pistillata OX=50429 GN=STING3 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001050 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15009 all species →	TMEM173	Transmembrane protein 173	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038623 all species →	Homologous_superfamily	Stimulator of interferon genes protein, C-terminal domain superfamily	Interproscan
IPR029158 all species →	Family	Stimulator of interferon genes protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR34339 all species →	STIMULATOR OF INTERFERON GENES PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000045 all species →	Biological Process	autophagosome assembly	Interproscan
GO:0002218 all species →	Biological Process	activation of innate immune response	Interproscan
GO:0005776 all species →	Cellular Component	autophagosome	Interproscan
GO:0005789 all species →	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0016239 all species →	Biological Process	positive regulation of macroautophagy	Interproscan
GO:0032481 all species →	Biological Process	positive regulation of type I interferon production	Interproscan
GO:0035438 all species →	Molecular Function	cyclic-di-GMP binding	Interproscan
GO:0045087 all species →	Biological Process	innate immune response	Interproscan
GO:0061507 all species →	Molecular Function	2',3'-cyclic GMP-AMP binding	Interproscan
GO:0061709 all species →	Biological Process	reticulophagy	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12654	STING1, TMEM173, MITA; stimulator of interferon genes protein	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.