Detailed information of FUN_023535-T1 in Acropora pulchra

Genomic Location: ptg000017l:8832748...8842001
NR annotation: XP_044171956.1, uncharacterized protein LOC114967769 isoform X2 [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9R159Disintegrin and metalloproteinase domain-containing protein 25 OS=Mus musculus OX=10090 GN=Adam25 PE=2 SV=1
Q9JLN6Disintegrin and metalloproteinase domain-containing protein 28 OS=Mus musculus OX=10090 GN=Adam28 PE=1 SV=3
Q9R158Disintegrin and metalloproteinase domain-containing protein 26A OS=Mus musculus OX=10090 GN=Adam26a PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000540 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00090
all species →		TSP_1Thrombospondin type 1 domainDomainInterproscan
PF00754
all species →		F5_F8_type_CF5/8 type C domainDomainInterproscan
PF07974
all species →		EGF_2EGF-like domainDomainInterproscan
PF08516
all species →		ADAM_CRADAM cysteine-richFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000421
all species →		DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR000884
all species →		RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR006586
all species →		DomainADAM, cysteine-rich domainInterproscan
IPR000742
all species →		DomainEGF-like domainInterproscan
IPR014716
all species →		Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR036056
all species →		Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR013111
all species →		DomainEGF-like domain, extracellularInterproscan
IPR036383
all species →		Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR002181
all species →		DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR008979
all species →		Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11905
all species →		ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAINInterproscan

 Gene Ontology
No Gene Ontology signature was detected for FUN_023535-T1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_023535-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP