Detailed information of FUN_023575-T1 in Acropora pulchra

Genomic Location: ptg000017l:9433158...9462693
NR annotation: XP_029206417.2, cGMP-specific 3',5'-cyclic phosphodiesterase-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B4LVU6cGMP-specific 3',5'-cyclic phosphodiesterase OS=Drosophila virilis OX=7244 GN=Pde6 PE=3 SV=1
Q298P4cGMP-specific 3',5'-cyclic phosphodiesterase OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=Pde6 PE=3 SV=3
B4JXX2cGMP-specific 3',5'-cyclic phosphodiesterase OS=Drosophila grimshawi OX=7222 GN=Pde6 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000883 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00233
all species →		PDEase_I3'5'-cyclic nucleotide phosphodiesteraseDomainInterproscan
PF01590
all species →		GAFGAF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003607
all species →		DomainHD/PDEase domainInterproscan
IPR029016
all species →		Homologous_superfamilyGAF-like domain superfamilyInterproscan
IPR002073
all species →		Domain3'5'-cyclic nucleotide phosphodiesterase, catalytic domainInterproscan
IPR036971
all species →		Homologous_superfamily3'5'-cyclic nucleotide phosphodiesterase, catalytic domain superfamilyInterproscan
IPR023088
all species →		Family3'5'-cyclic nucleotide phosphodiesteraseInterproscan
IPR023174
all species →		Conserved_site3'5'-cyclic nucleotide phosphodiesterase, conserved siteInterproscan
IPR003018
all species →		DomainGAF domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11347
all species →		CYCLIC NUCLEOTIDE PHOSPHODIESTERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004114
all species →		Molecular Function3',5'-cyclic-nucleotide phosphodiesterase activityInterproscan
GO:0007165
all species →		Biological Processsignal transductionInterproscan
GO:0008081
all species →		Molecular Functionphosphoric diester hydrolase activityInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_023575-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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