Gene detail

Detailed information of FUN_023580-T1 in Colpophyllia natans

Genomic Location: contig_46:806156...818959
NR annotation: XP_020622430.1, anaphase-promoting complex subunit 7-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

FUN_023580-T1

GCAGTtcaaaaaattgtcaaaacaTATAGCGGTTTAGATTTGTAAGTTACCTCTAAATTGCTATTGATCATCCCAATTTTATCTGCTAGGAAGCAAGATATTAAATCACTACAGCGCATCCTAAAAATCAATAATGACAGCTTCACTCGATCAGGTGAAAATTTTACACGAAGCTGGTTTGTTTTCGAGCTCTAAGCTGTTGGCAAGCTTTTTATTGTCTGCTACTGAGCATGGAACTCAGGATAAATATGAGCTCAATACCATGGTGAACAAGTACCAGCTGCTGGTGTATTTAGCTGATTCATTGTTTGATGACGAGCAATACAAAAGAGCAGAGCAATTTTACACAAGAGCAATccaattaaagaaaattatcatCAAACACAAACCAAAGACAAGTCCACCACTGGGTTTGCTGTCTGAGGTTGAAGTAAAATACAAGTTGTCACAATGCTATTTACATCTCAAGGAGTACAGAGAGGCAACTACAGTACTTGAATGTGTATCTCAGAAACAGAGATCACTGAAAATTAACATGTCCTTAGCTAAACTGTACCAAAGACAAGGCATGGAAAGATCGGCTATTTCTTGTTATAAGGAAGTTTTAAGaGTGTGTCCTTTAGCTCTCGAAGCTGTGGTTGGCTTGTTGTCCCTGGGTGTTCCTGGTTCTGAAGTGACATCACTAACTTCATCATCAACTTCTGCAATGGACTGGATTGGATCATGGATTAAAGCACAAGTGTTAGCAGCCGCAGGGAAGCATGCAAAGGGAGCTCAAGCACTGAAGATTCTGGAAACACAGtGTTTACGCGATAATGTGGAATTGTTGTGCAATGCTGCAGAGATGTTTTACAATGGTGGAGATTACAACAATGCTAAGTCTTTCTTTCAAAGGGCTCATTCTCTGGACCCGTGCGTTCTTCAGGGTATGGACACATATGCTTTCTTACTGTCACAAGTTGGATGTGGCAGTAATGAAGGGTTAGAAAAACTAGCTAAAGACCTCATTCAAGTCACACAGCTCAAGCCTGAGCCGTGGATTGCTATGGGCCATTTTTGTAACGCGACCAGTCGAAAACCTAGAGCTGTTTATTTTGCCCAGAAGGCCCATACTATTGACAGTCGTAACGTCCAAGCACTTATTTTGAAAGCGAGTTTGTTACAAGCATTAGACAAGCAGCAGGAATCTTTGCTGCATTTTCGTGAAGCAGTTAAGCTGGCTCCATGGAACTTTGAAGCTCAGAAAGGTCTTGTTGAGTGTTACGTGTCGGCAAAACGTCACAAAGAAGCTCTTACAGTGGCAAAGAACGCCCACAAGACATTAGGCGCGAATCCAAGGACTTTAACATTGTGTGCTTCAGTTATGGCTCAGGAACCTGCTTCTTATGACAAGGCCACCAGTATGCTGGAGAAGAGCTTAGCTCAGGACGAAACTTACACTGATGCTGTGTGTCTGCTGGCGGAAATCTTGGGCAAAAAACAGGAATATGATAAAGCTATAGCTCTTTTACGGAAGCATATGAGTCATGACCGCACCCCCCGGCTTCACCAGCTGCTGGGAGATTATTTAGCTCTGACGAGTGATTACCAAGAAGCTCTGGATCACTACACACAGGCACTGAGCATGAATCCTGGAGACAGCAAGGCAATGGAAGGAATACAAAATGTTGAACGAGCTAACGGAGGAGAAGTGGAACACGATAGTGGAGACGAGGCTGATGAACCCAACGGAGGGGTTAGTTTAGAAGAGGAGGATATCGAAGACGAAGAGCCCTGGGCACCACAAAATATTCGTGGAGCGCTCTTCTGACGGAAACTGGTTTAATTATGGAGCCGGAACATGTGCTATATGCAAAGAGCGTGGAAAACTGACTCCTGGTTAAACTGAACTGCGAAACAGAGGACAGTTGGAAGTGATCAAACTTCCAAGGAGCAGAAATGAACTGGTGGACTTCGAGCGAGTATGGACAATTTCTCCAGGCTTCTACCTTCATATAATACTGAAAACTTCATATATCTCATTCTCGTAACCTACTATGGCGTAGAAGTATTTGCTCAGTTTTTAAATAGTCCAAGACAAATAGATATTCGTAAACGTTTCCTGAGCAATTTCGTGCATGTACGTGTCCTTCAATAAGTAAG

Protein

Uniprot

Uniprot term	Description
Q9UJX3	Anaphase-promoting complex subunit 7 OS=Homo sapiens OX=9606 GN=ANAPC7 PE=1 SV=5
Q9WVM3	Anaphase-promoting complex subunit 7 OS=Mus musculus OX=10090 GN=Anapc7 PE=1 SV=3
Q54D58	Anaphase-promoting complex subunit 7 OS=Dictyostelium discoideum OX=44689 GN=anapc7 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14559	TPR_19	Tetratricopeptide repeat	Repeat	Interproscan
PF13181	TPR_8	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12558	CELL DIVISION CYCLE 16,23,27	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005680	Cellular Component	anaphase-promoting complex	Interproscan
GO:0016567	Biological Process	protein ubiquitination	Interproscan
GO:0045842	Biological Process	positive regulation of mitotic metaphase/anaphase transition	Interproscan
GO:0051301	Biological Process	cell division	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03354	APC7, ANAPC7; anaphase-promoting complex subunit 7	-	Chromosome and associated proteins	ko03036	deepkoala