Detailed information of FUN_023631-T1 in Acropora pulchra

Genomic Location: ptg000017l:10098501...10103721
NR annotation: XP_029201232.1, transcription factor SOX-1-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6IZ48Transcription factor Sox-8 OS=Tetraodon nigroviridis OX=99883 GN=sox8 PE=2 SV=2
P57073Transcription factor SOX-8 OS=Homo sapiens OX=9606 GN=SOX8 PE=1 SV=1
Q04886Transcription factor SOX-8 OS=Mus musculus OX=10090 GN=Sox8 PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009377 (this species only) · gene tree & orthology
Transcription factor familyHMG · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00505
all species →		HMG_boxHMG (high mobility group) boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036910
all species →		Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR009071
all species →		DomainHigh mobility group box domainInterproscan
IPR050140
all species →		FamilySRY-related HMG-box transcription factorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10270
all species →		SOX TRANSCRIPTION FACTORInterproscan

 Gene Ontology
No Gene Ontology signature was recorded for FUN_023631-T1 in Acropora pulchra.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_023631-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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