Gene detail

Detailed information of FUN_023633-T1 in Acropora pulchra

Genomic Location: ptg000017l:10122080...10139181
NR annotation: XP_029201215.2, transmembrane protein 180-like isoform X1 [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

FUN_023633-T1

ATGTTTCGTTCGCTGGTGATACACTCCATATTTCAACCGCCTGTAACAGTTTTACAGCCTGTGGCATTACTAGAACGAGGTGTGGCTTGTCTTTTTCGAAGAATGACGACAGATCCAGCTTTTGACAAACGAATACCTGATAAGTGGAGAGATTACAATGCATGTGGAGTTCCTATCAAGGGTGAAAGGATAATTGCTTTTAAAACTCCTCTGTCAAATAAATTTGACAATGAAAGTGATCAGGATAATGGAATAAAGTCATTTGAAAGATTCACACCAATGGACCTTCAAATTCATCTTAAGGAAGAGAAATGGAAGCTTGGACTGGTTGTTGACTTAACCAATACCTTCAGATATTACAATCCCAGGGAATTTTCAGACTATGGAGTGAAGTATAAAAAAATGAAATGTGTAGGAAGAGAAATACCAAATGAGGATTTAGTCAGAAGGTTCAAGACTGAAGTCACTCATTTTTTGGCACATTCCAAAGATTCTCTTGTTGGAGTACATTGCACACATGGGCTTAACAGAACTGGATATATTGTTTGTAGGTATCTCATTGAGTGCAGAGGATACACACCTGAAAAAGCTATTGCTGCTTTTAATGAAGCCAGAGGATATCCAGTTGAACGTGAAAACTACTTGCAAGACCTGAAGACAAGGGCTCCAAAATTTGAGGACCCTTCTTTGACTCAGAAGGAAGAGAGGGAAAAAAATGTGTCTTCTCGCAGCAGATCAAGATTTATCCATACCAAATCCAATTCTTGGCAAGCCTCTTGCAATGAAGATTTTGAAGCAGTCGACCATGGCCAATCCAGATACCACAGACATCGAACAGAGTCTTCTTACTTTTCCGCACATAACCTGGCACCCAAAAGTACCATACAAATCCTACGTATTCTCGTTCCCAGATTCTCTTGCGTGATAGTTTGTCAAGCTCTCGATTTCGATCTCCCGAGCTTGTGTGAATTTTATGTTTTCGTGTCACCATTATTTGTCCTTCATGTCGCCAATGTATTTGAAAGGATAATTATGTTTCATAAATCTTTCGCAGTCCGGATCGCTTATGGCTCCATGTCGCTCTATATAGCAATTCTTCATAATGTTTTCCTCTTGTACTACGTGGACATCTTTGTTTCTGTCTACAAAATTGATCGCAATTCTTTCTGGCTGGGCGAGACAATTTTTTTAGTGTGGAATTCATTAAATGATCCTCTATTTGGCTGGTTAAGTGACCACAGAGCTCTGGGGAAAAACCAGTCTGGCCTAAGTCAATCAGAAATTATTAAAAAACGTTTCAGGGCTTTGATGAAATATGGGCCTCTCTTTACACTTTCATTCCTGAGCATCTGGTTTCATTGGATGCATCCATCTATCCAGTTTGTCTTATGCTTGTGTTTGTATGATGGCTTCCTGACAATGATTGACTTAAACCATCTTGCCCTTCTGGCTGACCTGGCATTGTCCTCCAAGGACAGGACAAATCTTAATTGGTATTGTTCAGTCTTCAGTGGGTGTGGCTCTCTCTCAGTGTTCCTGTCACATCATTTTTGGGACAGAGACCACATGGGATCATTTCATGTGTTTTGCACATTGCTTTCTGCATTTTCCCTCGTTGGATTTTTCGTCAGTTCCTTTCTGCTAAAGCAACATTTTAGTACCACGAAAGTGAAAATTGACATTCCGCAAGAGAAGGAAAGGATAGAAATACAATCCACAGTTCCATCAGCTGATCAGGCCCTAGAGCTCAAGATCTTTCTCAAGCAACTCCTGACTCACTCAAACTTCATGTGGTTTGCAGCAATGAATTTAGTACAGGTTTTTCACTGTCATTTCAACAGCAATTTTTTCCCTCTGTTTTTGGACAAGTTGCTGGGAGATTCAATTTCTCCTCAGACAGGCTCCTTGTTGTTGGGTGTATCCTTTGTCGCACCTCACATCAACAATCTCTACTTTTTGGCTTTGTGTCGTCGATTTGGAGTTTACTCAGTGATTAAGTGGCTGTTTTATGTTAAGCTTGGTCTGAGCATGATCATGCTGGCGTGCGGCCCCAACTGGTCCACCTTGCTTTGTTTTTATATTGCAAGTAATCGCGTATTCACGGAAGGAACTTGTAAATTACTCAATCTTATAATCAGCGATCTTGTGGATGAAGATTTCGTTCTTCATAACCGTAAACAAGCCATTTCTGCGTTGATTTTTGGAACAGCTGCCCTTTTCTCCAAGCCTGGACAAACGATAGCTCCTCTTCTTGGAACATGGCTGTTAGCGGAGCAAACTGGCTACTCATTATTTTACACTGACGATCTATGGTCATCATCAACTGAGAAAAGAGCCAGTTTCCACGATAGCACAAGCGATACTTTGCGCTGGGGCTGTTTCTACGTCCTTGTTTTCGTACCAATTGTATGCGCATGCCTGCAAATTTTTGTTTGGACGCGCTTTAAGCTTCACGGTGGGAGACTTCGATGGGTAAAGCAAATGCGAGAGGGCCGATGGTTGTTGTCATCGGAAGTGTAA

Transcript

FUN_023633-T1

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5ZKJ5	Transmembrane protein 180 OS=Gallus gallus OX=9031 GN=MFSD13A PE=2 SV=1
Q6PDE8	Transmembrane protein 180 OS=Mus musculus OX=10090 GN=Mfsd13a PE=2 SV=1
Q14CX5	Transmembrane protein 180 OS=Homo sapiens OX=9606 GN=MFSD13A PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001617 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13347 all species →	MFS_2	MFS/sugar transport protein	Family	Interproscan
PF00782 all species →	DSPc	Dual specificity phosphatase, catalytic domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029021 all species →	Homologous_superfamily	Protein-tyrosine phosphatase-like	Interproscan
IPR036259 all species →	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR000340 all species →	Domain	Dual specificity phosphatase, catalytic domain	Interproscan
IPR016130 all species →	Active_site	Protein-tyrosine phosphatase, active site	Interproscan
IPR040035 all species →	Family	Transmembrane protein 180	Interproscan
IPR020422 all species →	Domain	Dual specificity protein phosphatase domain	Interproscan
IPR000387 all species →	Domain	Tyrosine-specific protein phosphatases domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR28658 all species →	TRANSMEMBRANE PROTEIN 180	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016311 all species →	Biological Process	dephosphorylation	Interproscan
GO:0006470 all species →	Biological Process	protein dephosphorylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_023633-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.