Detailed information of FUN_023688-T2 in Acropora pulchra

Genomic Location: ptg000017l:10637238...10642569
NR annotation: XP_015777282.1, PREDICTED: RING finger protein 145-like [Acropora digitifera]
Species abbreviation APULC · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q0IJ20RING finger protein 145 OS=Xenopus tropicalis OX=8364 GN=rnf145 PE=2 SV=1
Q5SWK7RING finger protein 145 OS=Mus musculus OX=10090 GN=Rnf145 PE=1 SV=1
Q96MT1RING finger protein 145 OS=Homo sapiens OX=9606 GN=RNF145 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009776 (this species only)
Ubiquitin familyE3|E3 activity RING|RING · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13705
all species →
TRC8_NTRC8 N-terminal domainDomainInterproscan
PF13639
all species →
zf-RING_2Ring finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050731
all species →
FamilyHRD1 family E3 ubiquitin-protein ligasesInterproscan
IPR001841
all species →
DomainZinc finger, RING-typeInterproscan
IPR025754
all species →
DomainTRC8-like, N-terminal domainInterproscan
IPR013083
all species →
Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22763
all species →
RING ZINC FINGER PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005783
all species →
Cellular Componentendoplasmic reticulumInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_023688-T2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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