Gene detail

Detailed information of FUN_023713-T1 in Dendrogyra cylindrus

Genomic Location: contig_48:1762349...1766504
NR annotation: CAH3168876.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

FUN_023713-T1

ATGGTTTTCCCACAAGTCATCGCAGGTTTTCGTGGTCTTCTGGACTTGATCGGTCTTCCCATGAATTTACTGGTAATAGTGACGATCGCatttgaaagaaaatttcaCGTGATGCGTTACATTCTACTCGCCAGCCTTGCAGTGTCGGATTTTCTCTTCTTAGCTCTCGCAAACTCATTCCTCATCGCAAGCACAGCACAAGAAAGATGGCTATATGGAAAAACAATGTGTGATCTCAACCCGTTCTTCGTGCTATACTTCTACCTTAAcacagttcttcatctgatagCCGTGTCTTAcgagcgatacagcgccatcgTCAAATCCCCCATGACGTATGATGGTACGATTACCAAGAGCAGAGTGGCGTCATTGATCTTCATCTGGGTAGCACCGATCCCGTTGTCCATCCTTCCGTTCGTTGGCTTTGGGCAGTATGTCTACAATCCAGAAGTGTTCTCTTGCGAACAACTTGCAGTACACGGTGCTTTAACGAGCATAGTGATTTTTACCGTTTTAACCTTCGTTGTTCCCTCCGTGATAATCGTTTTCCTCAACTGGTTTGTCTTCAAGACGGCTCAAACTCTGCAACACAACCCAGTACAAGTGGGAAGCATTGGCGGTTCTGATATGTCTGAAAACCAGTTGCAAGAGATGTCAAGGAGAATGATCGAACGGAAGGCAGCTGTTGATATTTGCATTATCATCGTGGCGTTTATGGTGTGCTTTCTTCCCGCCTGGATAGTGGGGATTTGCCGTCTGTTTTTCAAGAATCTCGATGTTCCTGCCAGCTTCGTGCTCGGTACCAATGCTATCTTTCACGCTAGTTCCCTATGCAACCCCATCATCTATTCCATCCGGAAAAAAGAGTTTCGAGCCGGTGTAAAGAAAGTGTTCAGGACGATGGGAGTCTGTGGAAGCCCTAACAGCCCAGAAAACAACGGAATTGGCGTGAACGACTTCGCATTGAGAGCCAACTTTGGCGCAGAAACCTCCACTACAAGACCAACAGCACCACAGGCAGCccggaaaattttcaaaatgttgtccgaagCTCTCGCAAACTCATTCCTCATCGCAAGCACAGCACAAGAAAGATGGCTGTATGGAAAAACAATGTGTGATCTCAACCCGTTCTTCGTGCTATACTTCTACCTTAAcacagttcttcatctgatagCCGTGTCTTAcgagcgatacagcgccatcgTCAAATCCCCCATGACGTATGATGGTACGATTACCAAGAGCAGAGTGGTGTTAATGATTTTCATCTGGGTAGCACCGACCCCGTTGTCCATCTTTCCGTTCGTTGGCTTTGGGCAGTATGTCTACAATCCAGAAGTGTTCTCTTGCGAACAACTTGCAGTACACGGTGCTTTAACGAGCATAGTGATTTTTACCGTTTTAACCTTCGTTGTTCCCTCCGTGATAATTGTTTTCCTCAACTGGTCTGTCTTCAAGACGGCTCAAACTCTGCAACACAACCCAGTACAAGTGGGAAGCATTGGCGGTTCTGATATGTCTGAAAACCAGTTGCAAGAGATGTCAAGGAGAATGATCGAACGGAAGGCAGCTGTTGATATTTGCATTATCATCGTGGCGTTTATGGTGTGCTTTCTTCCCGCCTGGATAGTGGGGATTTGCCGTCTGTTTTTCAAGAATCTCGATGTTCCTGCCAGCTTCGTGCTCGGTACCAATGCTATCTTTCACGCTAGTTCCCTATGCAACCCCATCATCTATTCCATCCGGAAAAAAGAGTTTCGAGCCGGTGTAAAGAAAGTGTTCAGGACGATGGGAGTCTGTGGAAGCCCTAACAGCCCAGAAAACAACGGAATTGGCGTGAACGACTTCGCATTGAGAGCCAACTTTGGCGCAGAAACCTCCACTACAAGACCAACAGCACCACAGGCAGCCCGGAATCGAGATGAAAGATTTCATGGCAGCACAGGACGAAATAAATTCACTCTCCACAGAAGTCATCTGTCTCCGATTCCAGAGATCACTGAACTGAAAGAGTCCGTCTGA

Transcript

FUN_023713-T1

Protein

Uniprot

Uniprot term	Description
P35404	5-hydroxytryptamine receptor 1B OS=Didelphis virginiana OX=9267 GN=HTR1B PE=2 SV=1
Q60484	5-hydroxytryptamine receptor 1D OS=Cavia porcellus OX=10141 GN=HTR1D PE=3 SV=1
P28221	5-hydroxytryptamine receptor 1D OS=Homo sapiens OX=9606 GN=HTR1D PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00001	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050569	Family	Trace Amine-Associated Receptor	Interproscan
IPR017452	Domain	GPCR, rhodopsin-like, 7TM	Interproscan
IPR000276	Family	G protein-coupled receptor, rhodopsin-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24249	HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016020	Cellular Component	membrane	Interproscan
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan