Detailed information of FUN_023769-T1 in Dendrogyra cylindrus

Genomic Location: contig_48:2581187...2594337
NR annotation: KAJ7382837.1, hypothetical protein OS493_032473 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P97527Contactin-5 OS=Rattus norvegicus OX=10116 GN=Cntn5 PE=1 SV=1
P68500Contactin-5 OS=Mus musculus OX=10090 GN=Cntn5 PE=1 SV=2
Q90W79Contactin-5 OS=Gallus gallus OX=9031 GN=CNTN5 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13927Ig_3Immunoglobulin domainDomainInterproscan
PF07679I-setImmunoglobulin I-set domainDomainInterproscan
PF01410COLFIFibrillar collagen C-terminal domainFamilyInterproscan
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051170FamilyNeural and epithelial cell adhesion domain-containing proteinInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR013098DomainImmunoglobulin I-setInterproscan
IPR000885DomainFibrillar collagen, C-terminalInterproscan
IPR008160RepeatCollagen triple helix repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12231CTX-RELATED TYPE I TRANSMEMBRANE PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0043005Cellular Componentneuron projectionInterproscan
GO:0005201Molecular Functionextracellular matrix structural constituentInterproscan

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