Detailed information of FUN_024005-T2 in Acropora pulchra

Genomic Location: ptg000018l:1108965...1118067
NR annotation: XP_029212171.2, protein cereblon-like isoform X3 [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5R6Y2Protein cereblon OS=Pongo abelii OX=9601 GN=CRBN PE=2 SV=1
Q96SW2Protein cereblon OS=Homo sapiens OX=9606 GN=CRBN PE=1 SV=1
Q68EH9Protein cereblon OS=Danio rerio OX=7955 GN=crbn PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006105 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02190
all species →
LON_substr_bdgATP-dependent protease La (LON) substrate-binding domain FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR034750
all species →
DomainCULT domainInterproscan
IPR003111
all species →
DomainLon protease, N-terminal domainInterproscan
IPR015947
all species →
Homologous_superfamilyPUA-like superfamilyInterproscan
IPR046336
all species →
Homologous_superfamilyLon protease, N-terminal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14255
all species →
CEREBLONInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016567
all species →
Biological Processprotein ubiquitinationInterproscan
GO:0031464
all species →
Cellular ComponentCul4A-RING E3 ubiquitin ligase complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_024005-T2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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