Gene detail

Detailed information of FUN_024034-T1 in Acropora pulchra

Genomic Location: ptg000018l:1540371...1552625
NR annotation: AFZ78088.1, alpha i G protein [Acropora palmata]
Species abbreviation APULC · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

FUN_024034-T1

ATTACTTCGGACAGTTTCAGATTCATCAAAATTAACAAAGCAAAAGAAGAAAGTGTTCAAGTATCTGGAAGAGTTTCACGATTAAAAATTCACTTTCAGTCTTTTGCCCCATTGAGGCTTGTTAAGGACTTCATGTACGGTGAACAAAGCGGTTTATTTTCATCGATATTCCAGCTCTTCTAGATCTACCTTACAACGAAGCGAAAAGACAGTTTTTAAATGTGATCAATCTCGTGTTCTTCACGGCTTGGCCAGTTCCGGTTTATTGCCGTACTTTTCCTTCTCAGAGTGGATATATCTTGGACTTGCCCATGCGACTCATGTCCTGTTTCATTAAAACGTGATCAAGAGACCCAAGGAAAGATTTTAAAATGGAAGGTTAAATTGAAAAAAAAAAAAAAACACCTGATGATGCATTTGGAAATTCTTTGCCGTTGGGAATTGAGAAAATTTCAAATATAAAAAGTCATGACGATAATTAGAACACAGTTAGCACTTCTAAGATTTGACACGGAATCGAAACATCCGGGGTCTTCAATTCTTCCCGTCGGCCATGCGCACGGGGTTTTTGCTTGTGCGGGCGTGGTAGTGACAGTAGTGGTTGGTTCTTCCAACAAAAGCGAAGTAAGGAGCAGCAGTATTACTGTTACGAAAGTGAAGGGAAACCTACATGGCGAAGTCGTGAGGGATTTCGATATATGTGCTTCGGGTAAAAGACGCCCCAAGACGTCCAATTATAGTTCTGGGCTTGTGTTTCCTGTAGTGAATATTGCGAGGTTGCGAAAGTTCACACTTCGATCAACCGTGCTTTTGCCATAGAAGTTAGCTCTACGTAGTCCTAACTCGATAACAAACATGGGATGCACAATCAGTGGCGAAGACAAGGCGGCCGTAGAGCGGAGTAAAATGATAGATAAGACGCTTCGTGCGGACGGCGAGAAAGCGGCGAGGGAAGTCAAGCTTCTCCTTTTGGGTGCTGGTGAATCAGGGAAGAGCACAATTGTGAAACAGATGAAAATTATTCATGAACATGGTTACACCCAAGAGGAATGTGCACAGTATAGGCAAGTTGTGTACAGTAACACAATTCAGTCAATGATTGCCATTATTAGAGCATTAGGAACATTGAAGATTGAATTTGGACACTTGGACAGAGCTGATGATGCAAGGGAGCTCTTTGCCTTGGCAGGAAGTATGGAAGATGTGAAATTCACGCCAGAGCTGGTCTCTATTATGAAGAGGTTATGGAATGACTCCGGAGTGCAAAACTGCTTTTCAAGATCGAGGGAATATCAACTGAACGATTCAGCTTCATACTACTTGAATGAGCTTGACAGACTAGGATCACCAAGTTACGTTCCAACAGAACAAGATGTTCTTAGAACAAGAGTGAAAACAACTGGAATTGTTGAGACTCATTTTACTTTCAAAGATTTACATTTCAAGATGTTTGATGTTGGAGGCCAGAGGTCTGAACGAAAGAAATGGATTCACTGCTTTGAAGGTGTTACTGCTATTATCTTCTGTGTGGCTCTGAGTGCGTATGATCTTGTGCTGGCAGAAGACGAGGAAATGAACCGCATGATGGAAAGCATGAAGCTATTTGACTCCATCTGTAACAACAAGTGGTTCACTGACACTTCCATAATCCTCTTCCTCAACAAGAAAGATTTGTTTGGAGCAAAAATCACACATTCACCTTTGACCATCTGCTTCCCAGAGTACACAGGTTCAAACACATATGAGGAAGCTGCGGCATATATCCAACTTCAGTTTGAGAATCTCAACAAGAGAAAGGACACAAAGGAGATTTACACTCATTTCACTTGTGCCACTGATACAAACAACATCCAGTTTGTGTTTGATGCTGTCACAGATGTCATCATTAAGAACAACCTCAAGGATTGTGGACTCTTCTAACTTTGTAAGTGATAATAGTAAAAACTGTTGTAAAGTCAGTGGCCTCCACTCAGATTTGCATGATTTTGCATTTTGATGAAAGCACTGAAAACAAGGGACACAACAGCCCTTGATGCAAATCTTGGCTGTCCCTGTAACATCTTAATAGATATAGCATGTGTTTAGTTTGATCACTTCTGTAAGTGAGTTAACCCAACCCAAGGTAATGGGTGAGCCAAAAATTAAACAGGTCAACTTCAGGTTTGCAGTCTGAAGGCCGACCTAGGCCCAGTTGTTTGACGACTGATCAAGTTAATCCCAGGTTAGCGTTAATTTAAATTGCGATTTATTTACCACTAAAGGAGGGTTTGCCACAAAATTGTGGCCCAATAAGGTTATAAGTTACGAATTTCTTTTCCCTAAACCTTAATCTTGTAAAAAAAAATCCTCCTTTAAAGATAAATAAATAATTAAATTTTCACTGATCCAGGATTAGCTTAATTGGGCTGAGGAGAAGTGAGTTACAGTACACATTAGCTTTGCAACGAGTTAATTTAAGTGTCACTCTTTGAGACAGTGGCAGTTAGAGATTTGCTTTGTATTTGGCTGTCATATTTGTGGCAGAAAATATGATGAATTAGCGGTGTTTGTCTTTCAGGT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P30676	Guanine nucleotide-binding protein G(i) subunit alpha OS=Patiria pectinifera OX=7594 PE=1 SV=3
P10824	Guanine nucleotide-binding protein G(i) subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gnai1 PE=1 SV=3
P63097	Guanine nucleotide-binding protein G(i) subunit alpha-1 OS=Bos taurus OX=9913 GN=GNAI1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000689 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00503 all species →	G-alpha	G-protein alpha subunit	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011025 all species →	Homologous_superfamily	G protein alpha subunit, helical insertion	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR001019 all species →	Family	Guanine nucleotide binding protein (G-protein), alpha subunit	Interproscan
IPR001408 all species →	Family	G-protein alpha subunit, group I	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10218 all species →	GTP-BINDING PROTEIN ALPHA SUBUNIT	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0019001 all species →	Molecular Function	guanyl nucleotide binding	Interproscan
GO:0031683 all species →	Molecular Function	G-protein beta/gamma-subunit complex binding	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0007188 all species →	Biological Process	adenylate cyclase-modulating G protein-coupled receptor signaling pathway	Interproscan
GO:0001664 all species →	Molecular Function	G protein-coupled receptor binding	Interproscan
GO:0005834 all species →	Cellular Component	heterotrimeric G-protein complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K04630	GNAI; guanine nucleotide-binding protein G(i) subunit alpha	-	GTP-binding proteins	ko04031	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.