Genomic Location: contig_50:888513...891213
NR annotation: KAJ7355112.1, hypothetical protein OS493_027901 [Desmophyllum pertusum]
Species Dendrogyra cylindrus · all data for this species · gene families
| CDS |
| FUN_024135-T1 |
| Transcript |
| FUN_024135-T1 |
| Protein |
| FUN_024135-T1 |
| UniProt accession | Description |
|---|---|
| Q9I9D5 | Retinal homeobox protein Rx1 OS=Psalidodon fasciatus OX=223369 GN=rx1 PE=2 SV=1 |
| O42357 | Retinal homeobox protein Rx2 OS=Danio rerio OX=7955 GN=rx2 PE=2 SV=1 |
| O42201 | Retinal homeobox protein Rx-A OS=Xenopus laevis OX=8355 GN=rax-a PE=2 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0002519 (this species only) · gene tree & orthology |
| Transcription factor family | Homeobox · all TF in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00046 all species → | Homeodomain | Homeodomain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR052631 all species → | Family | Paired homeobox Bicoid subfamily | Interproscan |
| IPR001356 all species → | Domain | Homeobox domain | Interproscan |
| IPR009057 all species → | Homologous_superfamily | Homeobox-like domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46255 all species → | SHORT STATURE HOMEOBOX | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0000981 all species → | Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0006357 all species → | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
| GO:1990837 all species → | Molecular Function | sequence-specific double-stranded DNA binding | Interproscan |
| GO:0003677 all species → | Molecular Function | DNA binding | Interproscan |
FUN_024135-T1.
