Gene detail

Detailed information of FUN_024199-T1 in Colpophyllia natans

Genomic Location: contig_48:1345607...1346957
NR annotation: XP_020606359.1, transcription factor HES-4-like [Orbicella faveolata]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
G5EF76	Helix-loop-helix protein lin-22 OS=Caenorhabditis elegans OX=6239 GN=lin-22 PE=1 SV=1

Gene family	Subfamily
Transcription Factors Family	bHLH

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00010	HLH	Helix-loop-helix DNA-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036638	Homologous_superfamily	Helix-loop-helix DNA-binding domain superfamily	Interproscan
IPR011598	Domain	Myc-type, basic helix-loop-helix (bHLH) domain	Interproscan
IPR050370	Family	Hairy and Enhancer of Split/HEY-related	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10985	BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0046983	Molecular Function	protein dimerization activity	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0009952	Biological Process	anterior/posterior pattern specification	Interproscan
GO:0050767	Biological Process	regulation of neurogenesis	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09087	HES2_6_7; hairy and enhancer of split 2/6/7	-	Transcription factors	ko03000	deepkoala