Detailed information of FUN_024210-T1 in Acropora pulchra

Genomic Location: ptg000018l:3480873...3490908
NR annotation: XP_044170389.1, LOW QUALITY PROTEIN: presequence translocated-associated motor subunit pam17, mitochondrial-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P34334Large ribosomal subunit protein eL21 OS=Caenorhabditis elegans OX=6239 GN=rpl-21 PE=1 SV=3
A5JSS2Large ribosomal subunit protein eL21 OS=Capra hircus OX=9925 GN=RPL21 PE=2 SV=1
O09167Large ribosomal subunit protein eL21 OS=Mus musculus OX=10090 GN=Rpl21 PE=1 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006391 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08566
all species →		Pam17Mitochondrial import protein Pam17FamilyInterproscan
PF01157
all species →		Ribosomal_L21eRibosomal protein L21eFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013875
all species →		FamilyMitochondrial import protein Pam17Interproscan
IPR001147
all species →		FamilyLarge ribosomal subunit protein eL21Interproscan
IPR008991
all species →		Homologous_superfamilyTranslation protein SH3-like domain superfamilyInterproscan
IPR036948
all species →		Homologous_superfamilyLarge ribosomal subunit protein eL21 superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR20981
all species →		60S RIBOSOMAL PROTEIN L21Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0001405
all species →		Cellular ComponentPAM complex, Tim23 associated import motorInterproscan
GO:0003735
all species →		Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840
all species →		Cellular ComponentribosomeInterproscan
GO:0006412
all species →		Biological ProcesstranslationInterproscan
GO:0022625
all species →		Cellular Componentcytosolic large ribosomal subunitInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_024210-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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