Detailed information of FUN_024239-T2 in Dendrogyra cylindrus

Genomic Location: contig_50:2437568...2471541
NR annotation: CAH3133335.1, unnamed protein product, partial [Pocillopora meandrina]
Species Dendrogyra cylindrus · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q96RW7Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2
D3YXG0Hemicentin-1 OS=Mus musculus OX=10090 GN=Hmcn1 PE=1 SV=1
Q8NDA2Hemicentin-2 OS=Homo sapiens OX=9606 GN=HMCN2 PE=1 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000305 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07679
all species →		I-setImmunoglobulin I-set domainDomainInterproscan
PF00090
all species →		TSP_1Thrombospondin type 1 domainDomainInterproscan
PF00530
all species →		SRCRScavenger receptor cysteine-rich domainDomainInterproscan
PF13927
all species →		Ig_3Immunoglobulin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR013098
all species →		DomainImmunoglobulin I-setInterproscan
IPR007110
all species →		DomainImmunoglobulin-like domainInterproscan
IPR036179
all species →		Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR003599
all species →		DomainImmunoglobulin subtypeInterproscan
IPR036772
all species →		Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR017441
all species →		Binding_siteProtein kinase, ATP binding siteInterproscan
IPR001190
all species →		DomainSRCR domainInterproscan
IPR011009
all species →		Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR036383
all species →		Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR000884
all species →		RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR017448
all species →		DomainSRCR-like domainInterproscan
IPR003598
all species →		DomainImmunoglobulin subtype 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45889
all species →		IG-LIKE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_024239-T2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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