Detailed information of FUN_024390-T3 in Acropora pulchra

Genomic Location: ptg000018l:5682608...5700115
NR annotation: XP_044177387.1, prickle planar cell polarity protein 3-B-like isoform X3 [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q80VL3Prickle planar cell polarity protein 3 OS=Mus musculus OX=10090 GN=Prickle3 PE=1 SV=1
O43900Prickle planar cell polarity protein 3 OS=Homo sapiens OX=9606 GN=PRICKLE3 PE=1 SV=2
Q7Z3G6Prickle-like protein 2 OS=Homo sapiens OX=9606 GN=PRICKLE2 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001077 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06297
all species →		PETPET DomainDomainInterproscan
PF00412
all species →		LIMLIM domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR033726
all species →		DomainLIM2 prickleInterproscan
IPR001781
all species →		DomainZinc finger, LIM-typeInterproscan
IPR010442
all species →		DomainPET domainInterproscan
IPR047120
all species →		FamilyPrickle/Espinas/TestinInterproscan
IPR033723
all species →		DomainPET prickleInterproscan
IPR033725
all species →		DomainLIM1 prickleInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24211
all species →		LIM DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K04511PRICKLE; prickle-Wnt signaling pathwayko04310deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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