Detailed information of FUN_024397-T2 in Colpophyllia natans

Genomic Location: contig_49:484969...492942
NR annotation: XP_020609225.1, E3 ubiquitin-protein ligase ZSWIM2-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q8NEG5E3 ubiquitin-protein ligase ZSWIM2 OS=Homo sapiens OX=9606 GN=ZSWIM2 PE=1 SV=2
Q9D9X6E3 ubiquitin-protein ligase Zswim2 OS=Mus musculus OX=10090 GN=Zswim2 PE=1 SV=1
Q9SLC4RING-H2 finger protein ATL40 OS=Arabidopsis thaliana OX=3702 GN=ATL40 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04434SWIMSWIM zinc fingerDomainInterproscan
PF13639zf-RING_2Ring finger domainDomainInterproscan
PF00569ZZZinc finger, ZZ typeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001841DomainZinc finger, RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR000433DomainZinc finger, ZZ-typeInterproscan
IPR039903FamilyE3 ubiquitin-protein ligase Zswim2Interproscan
IPR007527DomainZinc finger, SWIM-typeInterproscan
IPR043145Homologous_superfamilyZinc finger, ZZ-type superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21540RING FINGER AND SWIM DOMAIN-CONTAINING PROTEIN 2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15716ZSWIM2; E3 ubiquitin-protein ligase ZSWIM2EC:2.3.2.27
Ubiquitin systemko04121deepkoala

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