Detailed information of FUN_024454-T1 in Acropora pulchra

Genomic Location: ptg000018l:6567800...6574228
NR annotation: XP_029205983.2, RING finger protein 150-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5DTZ6RING finger protein 150 OS=Mus musculus OX=10090 GN=Rnf150 PE=2 SV=2
Q9ULK6RING finger protein 150 OS=Homo sapiens OX=9606 GN=RNF150 PE=1 SV=2
Q8VEM1E3 ubiquitin-protein ligase RNF130 OS=Mus musculus OX=10090 GN=Rnf130 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007045 (this species only)
Ubiquitin familyE3|E3 activity RING|RING · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02225
all species →		PAPA domainFamilyInterproscan
PF13639
all species →		zf-RING_2Ring finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001841
all species →		DomainZinc finger, RING-typeInterproscan
IPR046450
all species →		Homologous_superfamilyPA domain superfamilyInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR003137
all species →		DomainPA domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46539
all species →		E3 UBIQUITIN-PROTEIN LIGASE ATL42Interproscan

 Gene Ontology
No Gene Ontology signature was detected for FUN_024454-T1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_024454-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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