Genomic Location: ptg000018l:6775431...6793199
NR annotation: XP_015771637.1, PREDICTED: neuronal PAS domain-containing protein 2-like [Acropora digitifera]
Species abbreviation APULC · all data for this species · gene families
| CDS |
| FUN_024473-T1 |
| Transcript |
| FUN_024473-T1 |
| Protein |
| FUN_024473-T1 |
| UniProt accession | Description |
|---|---|
| P97460 | Neuronal PAS domain-containing protein 2 OS=Mus musculus OX=10090 GN=Npas2 PE=1 SV=1 |
| Q5ZQU2 | Neuronal PAS domain-containing protein 2 OS=Gallus gallus OX=9031 GN=NPAS2 PE=1 SV=1 |
| Q99743 | Neuronal PAS domain-containing protein 2 OS=Homo sapiens OX=9606 GN=NPAS2 PE=1 SV=3 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0008377 (this species only) |
| Transcription factor family | bHLH · all TF in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF14598 all species → | PAS_11 | PAS domain | Domain | Interproscan |
| PF00010 all species → | HLH | Helix-loop-helix DNA-binding domain | Domain | Interproscan |
| PF00989 all species → | PAS | PAS fold | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000014 all species → | Domain | PAS domain | Interproscan |
| IPR036638 all species → | Homologous_superfamily | Helix-loop-helix DNA-binding domain superfamily | Interproscan |
| IPR001067 all species → | Family | Nuclear translocator | Interproscan |
| IPR035965 all species → | Homologous_superfamily | PAS domain superfamily | Interproscan |
| IPR050933 all species → | Family | Circadian Clock Transcription Factors | Interproscan |
| IPR011598 all species → | Domain | Myc-type, basic helix-loop-helix (bHLH) domain | Interproscan |
| IPR013767 all species → | Domain | PAS fold | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR23042 all species → | CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0046983 all species → | Molecular Function | protein dimerization activity | Interproscan |
| GO:0003700 all species → | Molecular Function | DNA-binding transcription factor activity | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0005667 all species → | Cellular Component | transcription regulator complex | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0006355 all species → | Biological Process | regulation of DNA-templated transcription | Interproscan |
| GO:0000978 all species → | Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | Interproscan |
| GO:0000981 all species → | Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | Interproscan |
| GO:0006357 all species → | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
| GO:0034751 all species → | Cellular Component | aryl hydrocarbon receptor complex | Interproscan |
FUN_024473-T1.
