Detailed information of FUN_024519-T1 in Acropora pulchra

Genomic Location: ptg000018l:7647523...7769449
NR annotation: XP_044177261.1, LOW QUALITY PROTEIN: uncharacterized protein LOC114974735 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O70244Cubilin OS=Rattus norvegicus OX=10116 GN=Cubn PE=1 SV=2
F1RWC3Cubilin OS=Sus scrofa OX=9823 GN=CUBN PE=1 SV=3
O35276Neuropilin-2 OS=Rattus norvegicus OX=10116 GN=Nrp2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13306LRR_5BspA type Leucine rich repeat region (6 copies)RepeatInterproscan
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan
PF00431CUBCUB domainDomainInterproscan
PF00057Ldl_recept_aLow-density lipoprotein receptor domain class ARepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR023415Conserved_siteLow-density lipoprotein (LDL) receptor class A, conserved siteInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR026906RepeatBspA-type LRR regionInterproscan
IPR036055Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR002172RepeatLow-density lipoprotein (LDL) receptor class A repeatInterproscan
IPR000998DomainMAM domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR051560FamilyMAM domain-containing proteinInterproscan
IPR000859DomainCUB domainInterproscan
IPR037524DomainPA14/GLEYA domainInterproscan
IPR035914Homologous_superfamilySpermadhesin, CUB domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23282APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

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