Detailed information of FUN_024554-T2 in Colpophyllia natans

Genomic Location: contig_49:2663582...2676674
NR annotation: XP_020623092.1, uncharacterized protein LOC110060645 isoform X2 [Orbicella faveolata]
Species Colpophyllia natans · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9R0N4Synaptotagmin-10 OS=Mus musculus OX=10090 GN=Syt10 PE=1 SV=1
O08625Synaptotagmin-10 OS=Rattus norvegicus OX=10116 GN=Syt10 PE=2 SV=2
Q5T7P8Synaptotagmin-6 OS=Homo sapiens OX=9606 GN=SYT6 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006170 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00168
all species →		C2C2 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035892
all species →		Homologous_superfamilyC2 domain superfamilyInterproscan
IPR000008
all species →		DomainC2 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10024
all species →		SYNAPTOTAGMINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000149
all species →		Molecular FunctionSNARE bindingInterproscan
GO:0001786
all species →		Molecular Functionphosphatidylserine bindingInterproscan
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan
GO:0005544
all species →		Molecular Functioncalcium-dependent phospholipid bindingInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0014059
all species →		Biological Processregulation of dopamine secretionInterproscan
GO:0017156
all species →		Biological Processcalcium-ion regulated exocytosisInterproscan
GO:0017158
all species →		Biological Processregulation of calcium ion-dependent exocytosisInterproscan
GO:0030276
all species →		Molecular Functionclathrin bindingInterproscan
GO:0070382
all species →		Cellular Componentexocytic vesicleInterproscan
GO:0071277
all species →		Biological Processcellular response to calcium ionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_024554-T2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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