Detailed information of FUN_024672-T1 in Dendrogyra cylindrus

Genomic Location: contig_52:2327684...2336858
NR annotation: XP_020618287.1, E3 ubiquitin-protein ligase TRIM71-like, partial [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P49793Nuclear pore complex protein Nup98-Nup96 OS=Rattus norvegicus OX=10116 GN=Nup98 PE=1 SV=2
P52948Nuclear pore complex protein Nup98-Nup96 OS=Homo sapiens OX=9606 GN=NUP98 PE=1 SV=4
Q6PFD9Nuclear pore complex protein Nup98-Nup96 OS=Mus musculus OX=10090 GN=Nup98 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00643zf-B_boxB-box zinc fingerDomainInterproscan
PF21240Nup98_GLEBSNup98, Gle2-binding sequenceDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000315DomainB-box-type zinc fingerInterproscan
IPR037665FamilyNucleoporin peptidase S59-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23198NUCLEOPORINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0000973Biological Processpost-transcriptional tethering of RNA polymerase II gene DNA at nuclear peripheryInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005643Cellular Componentnuclear poreInterproscan
GO:0006405Biological ProcessRNA export from nucleusInterproscan
GO:0006606Biological Processprotein import into nucleusInterproscan
GO:0008139Molecular Functionnuclear localization sequence bindingInterproscan
GO:0017056Molecular Functionstructural constituent of nuclear poreInterproscan
GO:0034398Biological Processtelomere tethering at nuclear peripheryInterproscan
GO:0044614Cellular Componentnuclear pore cytoplasmic filamentsInterproscan

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