Detailed information of FUN_024700-T1 in Acropora pulchra

Genomic Location: ptg000018l:10003911...10037285
NR annotation: XP_015764702.1, PREDICTED: toll-like receptor 3 [Acropora digitifera]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002899 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13306
all species →		LRR_5BspA type Leucine rich repeat region (6 copies)RepeatInterproscan
PF13855
all species →		LRR_8Leucine rich repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR026906
all species →		RepeatBspA-type LRR regionInterproscan
IPR032675
all species →		Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR001611
all species →		RepeatLeucine-rich repeatInterproscan
IPR050333
all species →		FamilySmall Leucine-Rich ProteoglycansInterproscan
IPR003591
all species →		RepeatLeucine-rich repeat, typical subtypeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45712
all species →		AGAP008170-PAInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005615
all species →		Cellular Componentextracellular spaceInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_024700-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP