Detailed information of FUN_024718-T1 in Acropora pulchra

Genomic Location: ptg000018l:10240631...10265505
NR annotation: XP_029179721.2, ATP-dependent DNA helicase DDX11-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6AXC6ATP-dependent DNA helicase DDX11 OS=Mus musculus OX=10090 GN=Ddx11 PE=1 SV=2
F1R345ATP-dependent DNA helicase DDX11 OS=Danio rerio OX=7955 GN=ddx11 PE=2 SV=1
Q96FC9ATP-dependent DNA helicase DDX11 OS=Homo sapiens OX=9606 GN=DDX11 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003177 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06733
all species →
DEAD_2DEAD_2FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR010614
all species →
DomainRAD3-like helicase, DEADInterproscan
IPR006554
all species →
DomainHelicase-like, DEXD box c2 typeInterproscan
IPR013020
all species →
FamilyATP-dependent helicase Rad3/Chl1-likeInterproscan
IPR045028
all species →
FamilyHelicase superfamily 1/2, DinG/Rad3-likeInterproscan
IPR014013
all species →
DomainHelicase superfamily 1/2, ATP-binding domain, DinG/Rad3-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11472
all species →
DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →
Molecular FunctionDNA bindingInterproscan
GO:0003678
all species →
Molecular FunctionDNA helicase activityInterproscan
GO:0005524
all species →
Molecular FunctionATP bindingInterproscan
GO:0016818
all species →
Molecular Functionhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydridesInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0032508
all species →
Biological ProcessDNA duplex unwindingInterproscan
GO:0034085
all species →
Biological Processestablishment of sister chromatid cohesionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_024718-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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