Genomic Location: ptg000018l:12431296...12440082
NR annotation: XP_015770307.1, PREDICTED: collagen alpha-6(VI) chain-like [Acropora digitifera]
Species Acropora pulchra · all data for this species · gene families
| CDS |
| FUN_024904-T1 |
| Transcript |
| FUN_024904-T1 |
| Protein |
| FUN_024904-T1 |
| UniProt accession | Description |
|---|---|
| P13944 | Collagen alpha-1(XII) chain OS=Gallus gallus OX=9031 GN=COL12A1 PE=1 SV=3 |
| Q60847 | Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=2 SV=3 |
| P34576 | Transmembrane cell adhesion receptor mua-3 OS=Caenorhabditis elegans OX=6239 GN=mua-3 PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0007916 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF16754 all species → | Pesticin | Bacterial toxin homologue of phage lysozyme, C-term | Domain | Interproscan |
| PF00092 all species → | VWA | von Willebrand factor type A domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR031922 all species → | Domain | Pesticin, C-terminal | Interproscan |
| IPR002035 all species → | Domain | von Willebrand factor, type A | Interproscan |
| IPR036465 all species → | Homologous_superfamily | von Willebrand factor A-like domain superfamily | Interproscan |
| IPR023346 all species → | Homologous_superfamily | Lysozyme-like domain superfamily | Interproscan |
| IPR050525 all species → | Family | Extracellular Matrix Assembly and Organization | Interproscan |
| IPR023347 all species → | Homologous_superfamily | Lysozyme domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24020 all species → | COLLAGEN ALPHA | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003796 all species → | Molecular Function | lysozyme activity | Interproscan |
FUN_024904-T1.
