Gene detail

Detailed information of FUN_025285-T1 in Colpophyllia natans

Genomic Location: contig_53:274533...278204
NR annotation: XP_020618961.1, calcium/calmodulin-dependent protein kinase type II subunit delta-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

FUN_025285-T1

GGCAGAATttttaaacggggtagagaGTTAGTACAGCGTTCTGCAGTAGAGTTGTAAAGATGCCTTCGTGCTATTTCAAGGGTGATTCACGCATGTTTGAAGAGGAATACGAGATTCAGGAGCTGATAGGCGAGGGATCCTTCGCTAAGGTGTACAAATGCATAGAAAAGGAAAGCGGGAAAACTTTTGCCGTGAAAGAATTACAGATTGGTCAAAAAGTTTCAGATATGGAATCCATCAGGGAGGAAATCGAGACTTGGAAAGATTTGCAGCACGAAAACATTGTGTCCCTACACAGGACTTTTATAGATAACTCATGTTTTTATCTCGTGTGTGAATATCTGGATAGCGGAAGTTTATTTGACGAGATTGTGGGACAAAAGGTTTACAGCGAGGAACAAGCGCGCTCCATTATGACACAACTTTTACAAGCCCTGGAATACCTTCATGGTCAGCGGATTGTTCATCGCGATGTCAAAGCTGACAATCTTCTTCTGAGTCGCTCAAGATACTCAGATCACGTGACAGTAAAACTAGCTGATTTCGGTTTGGCGCGAAGATTGCCACATGACTCTGATGTCATTAGCTGTGACGCAAGCGGTGCGCCGTTGTTTCTTGCACCAGAAACAATTTTAGAAGATCTGATTGGTCAGGCCGTTGACATGTGGGCGTGTGGAGTCATATTGTTCATTCTTCTGGCAGGGTATCCACCATTTTGGAGCAGCAATGACGAGAAACTATTGCTGTCCATTTTGCAGGGTAATTACAGTATGCCTTCACCATACTGGGACAATGTGTCAGAGGAAGCCAAAGATCTCGTTCGGCGGCTAATTGTTGTGGAACCCAGTCAGAGACTCACAGCTTCTGAGGCGTTAAATCATCCATGGATTCAAATGGAAGCGCGGCAGCAAGCACCACAAAAGCACGGTCAGCGGAGAAACTTTGCGGCTGTAATTTGCGGTGTTCGAGCCATGTTGAAATTCCGAAGAATAAATCTCAAAGACTCGTGCCACAGAAGAAAGTCAGAAAAAGAAGTTCTTAACTAAAACATTTAGACTGGTCTTTATTCATAAACTGattatttaaaatgtttacaGGCTGACagaattgtaaacaaaatgtttttaagacCTCAGTTTGGATACGCCCAGTAGATGTACATTTATGAATTTGATATCTGTTAAAGGAAATATTATGCAAATCCCTCCTGATGTTCGTAGCGTAAATGTTCTGCTCATTCTTGTTTCTTCATCTCTGATGTTTTAGCTAGAACTAGCAATAAAGTTCAAAGCAAATCCTAACAAGTGTCGTTATCAAGTGTTCGTGTTATTTTGTCACTCCCAGTGCTTCCTAGACTAGAAACAGCAATTTCAAATTTATTATCCTCGTCTAAATTTTCTTCTTGCTCTACGAGCCATTCCTTGCCTAAGTTTCTAAGAAAAAATTCGAGTTAGAGAAACTTGAAGAGGTTATACAATTGCGACCTAAGACAGCATTTATGCCATGTATGTGTTTTTGTCAGTGAATGTTCCAGCAGTGTTTTAGAACGACCAATACAACATTCGCCCTTTTCCAGCCTTTCTCAATGACTTGCTGAGACCATCCATACTATATGATAGAAAAGGTCCAGTTgtcaattttttaatttacaattcTCCTTTCCTAAATCGCGGCGACTTCAGCAAAACAGCAAGCAGTGTAATAACAATAGTGATGAGATAAATCCAAGCAAAGAGACGATTGATAATCATGGCTGCCATTCTCCATTCTTCTCTCATGGCGTCTGCTTCTTCTTTTTTGAAGATGTTGTCCGTCAGAACAGTCATGTTCGATTGTTCTCGGCCTCTGTTTTCACGCAGTTTCACTGTAATAAAATAGAGAATAAGGCATTACCGTTAAATTACCGTTCTGATCACTCAGgccaaaagaaaatatttaagcaAAAGAGACCTGTAGCTCATCAAGGGTTACTTTCTTATCTCTCCCAGGCTCCTCGCGGCTTCTCT

Protein

Uniprot

Uniprot term	Description
Q2HJF7	Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Bos taurus OX=9913 GN=CAMK2D PE=2 SV=1
Q13557	Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Homo sapiens OX=9606 GN=CAMK2D PE=1 SV=3
Q6PHZ2	Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Mus musculus OX=10090 GN=Camk2d PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008271	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24347	SERINE/THREONINE-PROTEIN KINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04515	CAMK2; calcium/calmodulin-dependent protein kinase (CaM kinase) II	EC:2.7.11.17	Protein kinases	ko01001	deepkoala