Detailed information of FUN_025412-T1 in Colpophyllia natans

Genomic Location: contig_53:1573078...1588265
NR annotation: XP_020609907.1, mothers against decapentaplegic homolog 5-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9I8V2Mothers against decapentaplegic homolog 1 OS=Danio rerio OX=7955 GN=smad1 PE=2 SV=1
Q9I962Mothers against decapentaplegic homolog 1 OS=Coturnix japonica OX=93934 GN=SMAD1 PE=2 SV=1
Q1JQA2Mothers against decapentaplegic homolog 1 OS=Bos taurus OX=9913 GN=SMAD1 PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilyMH1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03725RNase_PH_C3' exoribonuclease family, domain 2DomainInterproscan
PF03165MH1MH1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003619DomainMAD homology 1, Dwarfin-typeInterproscan
IPR015847DomainExoribonuclease, phosphorolytic domain 2Interproscan
IPR036578Homologous_superfamilySMAD MH1 domain superfamilyInterproscan
IPR013790FamilyDwarfinInterproscan
IPR036345Homologous_superfamilyExoribonuclease, PH domain 2 superfamilyInterproscan
IPR027408Homologous_superfamilyPNPase/RNase PH domain superfamilyInterproscan
IPR013019DomainMAD homology, MH1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13703SMADInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0007179Biological Processtransforming growth factor beta receptor signaling pathwayInterproscan
GO:0009653Biological Processanatomical structure morphogenesisInterproscan
GO:0030154Biological Processcell differentiationInterproscan
GO:0030509Biological ProcessBMP signaling pathwayInterproscan
GO:0060395Biological ProcessSMAD protein signal transductionInterproscan
GO:0070411Molecular FunctionI-SMAD bindingInterproscan
GO:0071144Cellular Componentheteromeric SMAD protein complexInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan

TOP