Gene detail

Detailed information of FUN_025483-T1 in Colpophyllia natans

Genomic Location: contig_53:2441932...2442879
NR annotation: XP_020607957.1, high mobility group protein B2-like [Orbicella faveolata]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q4WY33	Non-histone chromosomal protein 6 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=nhp6 PE=3 SV=1
P40632	High mobility group protein homolog NHP1 OS=Babesia bovis OX=5865 PE=1 SV=1

Gene family	Subfamily
Transcription Factors Family	HMG

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09011	HMG_box_2	HMG-box domain	Domain	Interproscan
PF00505	HMG_box	HMG (high mobility group) box	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036910	Homologous_superfamily	High mobility group box domain superfamily	Interproscan
IPR050342	Family	High Mobility Group Box (HMGB)	Interproscan
IPR009071	Domain	High mobility group box domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48112	HIGH MOBILITY GROUP PROTEIN DSP1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008301	Molecular Function	DNA binding, bending	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10802	HMGB1; high mobility group protein B1	-	Exosome	ko04147	deepkoala