Detailed information of FUN_025514-T1 in Dendrogyra cylindrus

Genomic Location: contig_56:1155997...1176821
NR annotation: XP_027036462.1, TPR repeat-containing protein DDB_G0287407-like [Pocillopora damicornis]
Species Dendrogyra cylindrus · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O08653Telomerase protein component 1 OS=Rattus norvegicus OX=10116 GN=Tep1 PE=1 SV=1
P97499Telomerase protein component 1 OS=Mus musculus OX=10090 GN=Tep1 PE=1 SV=1
Q99973Telomerase protein component 1 OS=Homo sapiens OX=9606 GN=TEP1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001124 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13191
all species →
AAA_16AAA ATPase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR011990
all species →
Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR051191
all species →
FamilyDDB1-CUL4-associated factor 12Interproscan
IPR041664
all species →
DomainOrc1-like, AAA ATPase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19860
all species →
DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0080008
all species →
Cellular ComponentCul4-RING E3 ubiquitin ligase complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_025514-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP