Detailed information of FUN_025564-T3 in Acropora pulchra

Genomic Location: ptg000019l:4492005...4511139
NR annotation: XP_029206673.2, coatomer subunit beta'-like isoform X2 [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O55029Coatomer subunit beta' OS=Mus musculus OX=10090 GN=Copb2 PE=1 SV=2
O35142Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3
P35605Coatomer subunit beta' OS=Bos taurus OX=9913 GN=COPB2 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004164 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04053
all species →		Coatomer_WDADCoatomer WD associated region RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006692
all species →		DomainCoatomer, WD associated regionInterproscan
IPR036322
all species →		Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
No PANTHER signature was detected for FUN_025564-T3. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
GO termCategoryDescriptionSource
GO:0005198
all species →		Molecular Functionstructural molecule activityInterproscan
GO:0006886
all species →		Biological Processintracellular protein transportInterproscan
GO:0016192
all species →		Biological Processvesicle-mediated transportInterproscan
GO:0030117
all species →		Cellular Componentmembrane coatInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_025564-T3.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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