Detailed information of FUN_025627-T1 in Acropora pulchra

Genomic Location: ptg000019l:4987064...4991207
NR annotation: XP_029205494.2, brevican core protein-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
D2YW40Snaclec rhodocetin subunit delta OS=Calloselasma rhodostoma OX=8717 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000007 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00008
all species →		EGFEGF-like domainDomainInterproscan
PF00059
all species →		Lectin_CLectin C-type domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742
all species →		DomainEGF-like domainInterproscan
IPR016187
all species →		Homologous_superfamilyC-type lectin foldInterproscan
IPR050801
all species →		FamilyCalcium-Dependent Lectins in Immunity and DevelopmentInterproscan
IPR016186
all species →		Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR001304
all species →		DomainC-type lectin-likeInterproscan
IPR003609
all species →		DomainPAN/Apple domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22801
all species →		LITHOSTATHINEInterproscan

 Gene Ontology
No Gene Ontology signature was detected for FUN_025627-T1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_025627-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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