Detailed information of FUN_025646-T1 in Acropora pulchra

Genomic Location: ptg000019l:5215853...5216776
NR annotation: XP_015747285.1, PREDICTED: exonuclease 3'-5' domain-containing protein 1-like [Acropora digitifera]
Species abbreviation APULC · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002014 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01612
all species →		DNA_pol_A_exo13'-5' exonucleaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036397
all species →		Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR002562
all species →		Domain3'-5' exonuclease domainInterproscan
IPR012337
all species →		Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR052144
all species →		FamilypiRNA biogenesis EXD1-related proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46628
all species →		PIRNA BIOGENESIS PROTEIN EXD1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan
GO:0006139
all species →		Biological Processnucleobase-containing compound metabolic processInterproscan
GO:0008408
all species →		Molecular Function3'-5' exonuclease activityInterproscan
GO:0034587
all species →		Biological ProcesspiRNA processingInterproscan
GO:1990923
all species →		Cellular ComponentPET complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_025646-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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