Detailed information of FUN_025685-T1 in Colpophyllia natans

Genomic Location: contig_54:2465902...2486287
NR annotation: XP_020617405.1, uncharacterized protein LOC110055361 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20642TAF1C_HBTAF1C, helical bundle domainDomainInterproscan
PF20641TAF1C_beta-propTAF1C, beta-propellerRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR038801FamilyTATA box-binding protein-associated factor RNA polymerase I subunit CInterproscan
IPR049090DomainTAF1C, helical bundle domainInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR049087DomainTAF1C, beta-propeller domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15319TATA BOX-BINDING PROTEIN ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT CInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0001164Molecular FunctionRNA polymerase I core promoter sequence-specific DNA bindingInterproscan
GO:0001650Cellular Componentfibrillar centerInterproscan
GO:0006360Biological Processtranscription by RNA polymerase IInterproscan

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