Detailed information of FUN_025729-T1 in Dendrogyra cylindrus

Genomic Location: contig_57:533580...542616
NR annotation: XP_020605885.1, sodium/calcium exchanger 1-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q01728Sodium/calcium exchanger 1 OS=Rattus norvegicus OX=10116 GN=Slc8a1 PE=1 SV=3
P70414Sodium/calcium exchanger 1 OS=Mus musculus OX=10090 GN=Slc8a1 PE=1 SV=1
P48766Sodium/calcium exchanger 1 OS=Cavia porcellus OX=10141 GN=SLC8A1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01699Na_Ca_exSodium/calcium exchanger proteinFamilyInterproscan
PF16494Na_Ca_ex_CC-terminal extension of sodium/calcium exchanger domainFamilyInterproscan
PF03160Calx-betaCalx-beta domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051171FamilyCalcium/Cation AntiporterInterproscan
IPR004836FamilySodium/calcium exchanger proteinInterproscan
IPR038081Homologous_superfamilyCalX-like domain superfamilyInterproscan
IPR004837DomainSodium/calcium exchanger membrane regionInterproscan
IPR032452DomainSodium/calcium exchanger domain, C-terminal extensionInterproscan
IPR044880Homologous_superfamilyNCX, central ion-binding domain superfamilyInterproscan
IPR003644DomainNa-Ca exchanger/integrin-beta4Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11878SODIUM/CALCIUM EXCHANGERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005432Molecular Functioncalcium:sodium antiporter activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0015491Molecular Functionobsolete cation:cation antiporter activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0030001Biological Processmetal ion transportInterproscan
GO:0030424Cellular ComponentaxonInterproscan
GO:0035725Biological Processsodium ion transmembrane transportInterproscan
GO:0042383Cellular ComponentsarcolemmaInterproscan
GO:0098703Biological Processcalcium ion import across plasma membraneInterproscan
GO:0098794Cellular ComponentpostsynapseInterproscan
GO:0006816Biological Processcalcium ion transportInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0007154Biological Processcell communicationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K05849SLC8A, NCX; solute carrier family 8 (sodium/calcium exchanger)-Glycosaminoglycan binding proteinsko00536deepkoala

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